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Gene detail [Fasta]

Species Camponotus floridanus
GeneCFLO14554
Positionscaffold2146:192713..202104[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/cflo_33/?name=CFLO14554
sequence mRNA:
>CFLO14554-RA
ATGCCACGTATTGTGGGCTTGCTTATGTTTAGTTCCTTGTATTTTTATTGTTATGGCTGGTATGATGAGTCTTATTTAGA
GGAATTCTCTAGGGAACACTGCGATAAACCTGAGTGGTTTCAATGTGATAGTGGCCAGTGCGTAGCATTTATATATCAAT
GCGATGGAGATAGAGATTGTTGGGATGGATCAGATGAAAAAAACTGTAACAAAAATTTTACTATTTCATATCCTCACTAC
ATAATATGCGCCACAAATGAATTTAAATGCAAAAATAAAGATTGTATACCGGAAGGGAAGTTCTGTGATACAGTAAAGGA
TTGCAGTGATGGAAGCGACGAGTATGATGGTTGCGTAAATGAGTTAAAATGCGATGACAAATTTCGATGTCAAGATAAAC
ATTGTATAAGGAAAGATTGGGTTTGTGATAATAGAAAGGATTGTCCCGATGGCAGCGATGAAAGCAATTGCGACAATAAG
ACGTTATCTGCAAGTGATTGTAAAAATGCATATGATCGATTCTTATGCTTAAATGAACGATGCATATCTCTTAATGCAGT
GTGTGATGAAAAAAACGATTGTGGCGATGGATCAGATGAAGATCACCGTTGTAAAATACCTTGCACATTGTTAAATTGCA
GTGACAATTGCAAACAAACACCTGATGGACCTAAATGTATCTGCAAACCAGGTTATAAAATTCAAGATACAATCACTTGT
ATAGATATCGATGAATGTCAGATTTATGGCATATGCGATCAAGGATGCGTCAATACGGTAGGATCGTATAAATGTACCTG
CGAAACAGGTTACTTCATGCAAGATGATATGAAAACATGCAAAGCTACGACAAACAATGCTGCGAAAAACTTAAGTCATG
TTTCCAGTATCGCTGTAAATGGAGATTACATCTATTGTTCGAACCGTTTTAAAGATTTCCAAACAATTGTAGCGAGCACT
ATTATTGAAGGAAAACAAGAAGCCATTGTTACACAAGGTTTGGACTCGGTATCGGGAATAGCCGTGGATTGGATTACGGG
TAATATATATTTTACCGATGATGGTAACAAGCATATCGGGATTTGTAACGCTAATGGCACGTATTGTACCATATTGATAA
GTGAGCAATCTAAACCGCGAGGAATCGTTCTATTACCAATTAAAGGAATAATGTTTTGGTGCGATGTGGGTTTCCCACAT
ATTGGAATAGCTGAAATGGATGGCAAAAACAGTAGCTCATTTATTACTGATAACTTAGAATGGCCCGTCAGTTTAACTAT
TGACTATCCGAATAATCGTTTATATTGGTTGGAAAAGAAGAAAAATGTAATCGAATCAATACGCTTAGACGGCACCGATC
GAAGAGTTGTATTGGACGATATAATCCAATCTCCATATTCTTTGGCGGTTTTCGAAAATAAATTATATTGGAGCGATTGG
CACGAAAATACGATACAATCTTGCGATAAATTTACCGGAAAGGATTGGAAAATCATAACTCACACATTAACCAAACCTTA
TGACATACATATAGATCATTCGGCAATAAAACCCAAAATTCTAAATCCATGTCATCCTAATCCATGTTCTCAATTATGTA
TGTTGAATCGAGATAAAGGCTATACATGTGGTTGCACTATAGATAAAGAATTGAAAGCCGATAATCATACGTGTCGAGAA
GTAAAGAAGGAGCAGCACCTTATTATCATCATGGGAAATACATTTATAGATTATTTTCACAACTTTTTGGGAAAGCCAAA
AATAACTACGAGTACTACCTCAAGATTTATAACTGCAGCAACTTATGATTCACTTACTGGCACTATAATTGCAAGTGATA
AACATACGAATTATATCATTCGTTATGATCCAAATAGCGGCATTACTGAAAATCTTATACCGTTCAACAATGCAATATTG
GGAGGAATAGCATTTGATTATATTGGTAATAATTTATATTTATCGAATAAAGAAGACCAAACTATCGAAGTACATAGCTT
GACAACCAAAACGAAGACGGTCTTTTATTTTGAGGATCGACCTTGCAGTATTGTTTTAGCGCCTGAAGAAGGCATAATGT
TCATCGTATTCAATGTAAAATATTCAAGATTATATACACCGTCGTATCGTTTAGAAAAAATGAAAATGAATGGAATCGGC
CCGCGAAATTCAATTAACACAATTAGGAATATGGAGTATACAGAAATGTTATTGCATTATGACACAGCTAAAAAAACACT
TTTTGTGACTGATTTTGGTGAAATTATGTCATATCAAGCTGAAAATCGATATCTCGTTCATAACGGATTCTTTTCACTTG
CGAGTATTACAACTGCCGGAGATGATATATTCTGGACGAAACCCGACTCTAATGTATTGTATAGCATAAATTATAAAAGT
AATAATAGATTCTTTAACCATGTTGCATTACGTATGCCTGTAAGTACAGAAATTCCACTTGTGGTAGCTTTGCACAATAT
TGTTACACACAAGGAGTACGGTTGTCAAAAAAATAATGGAAATTGTTCACATGTGTGTTTGCCTTCCTCTGCTACTTTAT
TTATTTGTGCTTGTCCTCCTGGAATGATGCTAAGTGCGAACAATCGTACATGTACCTTGCAGTCTGCGTGTCGTACTGAT
GAAATCAAATGCAGCGAACATGACATCTGCATAAACCAACATCAGTGGTGCGATGGTAACATGGACTGTCCAAACGGTGA
GGATGAAGCGAGCTACTGCGGTGAGTCTGGCATTTGCGAGAAAGATCAATTTATGTGTAAAGATGGTACGTGCATCAATT
CAATGGATCGTTGCAATTCGAAGTACGAATGCCCTGATAAATCGGACGAGGAGGATTGTCCTGTGCTGCAGTGCCACAGT
GATGAATTTCAATGTCATGATGGAACTTGCATATCGAATTCCTTAGAATGTGATGGGCATAATGATTGTTTTGATTTTTC
CGATGAAATAAATAATCATTGCAATGAGCGTACGTGTTCTCCGAATAAATTTATGTGCAAAGATGTGAGAAATTGTATAC
CAAAGGAATGGGAATGCGACGGAGAGCGAGATTGCTCGGATGGATCGGATGAACTCGGGGAATGCAGCGTAAACATCTGT
GGCGACGGAAAATTAAAATGTAATAATGGTCGTTGCATATCATCTTCATTGAAGTGCAATGGCATCGATGATTGCGGCGA
TGAGTCTGACGAGAAATATTGTTTGAACGAAAAATCTATTAATTGTACCGATGATAAATATTTATGCTTCAACACTGATA
TATGTCTCCCGAAGAAAGTAAAATGCAACGGTGTTCAAGATTGTCCAAAAAACGACGATGAGCATCATTGCACATATTGT
TTCAAGGATGAATTTGCCTGTGATAATGAGAAATGCATTCCGCAGAGCTGGGTATGTGATAAAACCGATGATTGCGGTGA
CAAATCAGACGAGAAGGACTGTGATGGTAGTAAGTGGAGGAAGGTCAATGTTAACACATCAAACATGTGTGAAGAATTTA
AATGCACTACGGGCATTTGTCTATCATTCGACAAAGTATGTGACGGTATTCGAGACTGTCTGGACGGCAGTGATGAAAAT
GGATTATGTACAAGCTCTTGTGCGCACAACAATGTCTGCAAAGATATATGTTACAAGACACCACTTGGGGGAGTTTGTGG
TTGTCAAACAGGATATCGTTTGGCCGCTGACACGAAGTCATGTGATGATATAAACGAATGCGAGCTTGATGTTTGCTCGC
AGATTTGTCGAAATATTGTGGGCTCTTTTCAATGTTCATGTCACGATGGATATGTTATTCGCAGCGATAGAATTTCTTGT
AAAGCTATCGGACCGCCAATGGAATTAATTACTGTTACCGATGATAATATCAGGAAAATATCATCGAATTTACTCTCAAT
TGAAGTAATTCATTCGTTAACGGGCCTGAGTGTAATTGGTTTCGACGTAAATGCACTTGATGATGCTATTTATTGGAGTA
ACGGTTAG
PEP:
>CFLO14554-PA
MPRIVGLLMFSSLYFYCYGWYDESYLEEFSREHCDKPEWFQCDSGQCVAFIYQCDGDRDCWDGSDEKNCNKNFTISYPHY
IICATNEFKCKNKDCIPEGKFCDTVKDCSDGSDEYDGCVNELKCDDKFRCQDKHCIRKDWVCDNRKDCPDGSDESNCDNK
TLSASDCKNAYDRFLCLNERCISLNAVCDEKNDCGDGSDEDHRCKIPCTLLNCSDNCKQTPDGPKCICKPGYKIQDTITC
IDIDECQIYGICDQGCVNTVGSYKCTCETGYFMQDDMKTCKATTNNAAKNLSHVSSIAVNGDYIYCSNRFKDFQTIVAST
IIEGKQEAIVTQGLDSVSGIAVDWITGNIYFTDDGNKHIGICNANGTYCTILISEQSKPRGIVLLPIKGIMFWCDVGFPH
IGIAEMDGKNSSSFITDNLEWPVSLTIDYPNNRLYWLEKKKNVIESIRLDGTDRRVVLDDIIQSPYSLAVFENKLYWSDW
HENTIQSCDKFTGKDWKIITHTLTKPYDIHIDHSAIKPKILNPCHPNPCSQLCMLNRDKGYTCGCTIDKELKADNHTCRE
VKKEQHLIIIMGNTFIDYFHNFLGKPKITTSTTSRFITAATYDSLTGTIIASDKHTNYIIRYDPNSGITENLIPFNNAIL
GGIAFDYIGNNLYLSNKEDQTIEVHSLTTKTKTVFYFEDRPCSIVLAPEEGIMFIVFNVKYSRLYTPSYRLEKMKMNGIG
PRNSINTIRNMEYTEMLLHYDTAKKTLFVTDFGEIMSYQAENRYLVHNGFFSLASITTAGDDIFWTKPDSNVLYSINYKS
NNRFFNHVALRMPVSTEIPLVVALHNIVTHKEYGCQKNNGNCSHVCLPSSATLFICACPPGMMLSANNRTCTLQSACRTD
EIKCSEHDICINQHQWCDGNMDCPNGEDEASYCGESGICEKDQFMCKDGTCINSMDRCNSKYECPDKSDEEDCPVLQCHS
DEFQCHDGTCISNSLECDGHNDCFDFSDEINNHCNERTCSPNKFMCKDVRNCIPKEWECDGERDCSDGSDELGECSVNIC
GDGKLKCNNGRCISSSLKCNGIDDCGDESDEKYCLNEKSINCTDDKYLCFNTDICLPKKVKCNGVQDCPKNDDEHHCTYC
FKDEFACDNEKCIPQSWVCDKTDDCGDKSDEKDCDGSKWRKVNVNTSNMCEEFKCTTGICLSFDKVCDGIRDCLDGSDEN
GLCTSSCAHNNVCKDICYKTPLGGVCGCQTGYRLAADTKSCDDINECELDVCSQICRNIVGSFQCSCHDGYVIRSDRISC
KAIGPPMELITVTDDNIRKISSNLLSIEVIHSLTGLSVIGFDVNALDDAIYWSNG
Swiss-ProtVitellogenin receptor
SUPERFAMILYSSF57196  EGF/Laminin superfamily     
Gene3DG3DSA:2.120.10.30     
PfamPF00057  Ldl_recept_a; Low-density lipoprotein receptor domain class A     
SMARTSM00181     
ProSiteProfilesPS51120  LDLRB; LDL-receptor class B (LDLRB) repeat profile.     
PRINTSPR00261     
ProSitePatternsPS01187  EGF_CA; Calcium-binding EGF-like domain signature.     

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