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Gene detail [Fasta]

Species Danaus plexippus
GeneDPOGS200340
PositionDPSCF300026:478336..493234[GBrowse]
MonarchBasehttp://monarchbase.umassmed.edu/tools3/Get_gene.cgi?id=DPOGS200340
sequence mRNA:
>DPOGS200340-TA
ATGTCTGTGAGGCAGCCGGTGGTCATTGAAGGGGAGTACACGGTGTATGTGGGCACATGGACAGAATGTAGTACTGGCGA
CGGAGATCAAGCTAAGTCTTTCGACAGATATAACGCTCGTCTGGAATCCGATTCTCTGGTGCACACTCCACGTCTGGGAC
TTCAGAGACGTCAAGTGCAATGTCGGAGAAAAGATGGCAGATTTGTAGAAGCTCTGTACTGCGGGATTGCCATAGCAAAC
ATCGGCACAACTCGCGTGTGCGTGATGCGTGAGGACTGTTCCTTGGCTGAATGGTTGCCATGGCGACCAAGATCTGATGG
AGCTCTAGTAAGAACAAGACGTTTACGAAGACTGTCACAAGGCGGAGGCAAAGAATGCGACGTGGTCGAAGAAGTACGAC
CTACTGTTTTGGAGACTACGGCACATTGGACTCCGGGTCCTTGGGGACCATGCCGTGTTGCTGTGGAACAAGCGGCCACT
GCTGCACCAACTGATGATGACGATGACGCGGATGACAATGACGCGATTTACGACGAGGATGACGAGAGTGACGAAAGCGA
GCAGTCAAGCTGTGGGGGCGGAGTGCAGCGACGTGCTGCGACCTGCGTCCGGGCAGACGGGCGAGCGTTGCACGACGCGC
AGTGTGCTCATGCAGTTATGCCGACACTCGTGCAACCTTGCGAGGTACCTTGCCCACGTGATTGTGAAGTTGGAGAATGG
AGTGAATGGGGTGCCTGTCAGCCTACTGACGGATGTCCTCTTTACCCAGTACAACAACTCACAACTACTGGGTACAGCGT
ACGTCGTCGAAGAGTAACAGCAGCAGCATCCGGTGGAGGGGCGCCATGTCCTCCTCTAGAGGAAAAACGTACTTGCACTA
CACCAAGATGTGCTGCGTGGAAAGCACTGCCGTGGGGCCCCTGTGTATTGACTCAACCCCATACTAGTTGTGGACCAGGC
CGACGTACCAGAGAACTTAGATGCATGGGACACGATGGAAAGGAAGCTCAACGAGCGTGGTGTAACACTGGCGCTCCACC
ACGCAGTGAACGATGTCGTATCGCTTGTCCGGGAGACTGTGTAGTGTCTGCATGGGCGGAGTGGTCACCTTGTTCAGCGA
GTTGCGTCGCCCCCGGACATGCACGACCCACGCGTACTAGACGCAGACATATACTTGCCCACGCTGCACCAAATGGCTGG
CCCTGCCCATCTGAAGACCAACTGATTCAAAACGAGACATGCAACACCCACGCTTGTGCCACTTATTCCTGGCTTGCAAC
GCCTTGGGGACCTTGTGAGCGTCGCCGGCAAGATTTCATACCGGCTACCAATTACACAGATCTTCTGGATAATGAACCGT
TCAATGAAAGCGATGACGAAGAACCTTGTATTGAAGAAGGTGAAATGAGCAGAGACGTTATGTGTGTTCAGAATAATGCT
GACGTTGTCAGAGAAGCTCTATGTGCTCCATTACGTCGCCCAGCGTCCCGTCGGGCGTGTACTGTAAGATGTCGACGAGG
TTGCAGGGTTGAAGCTTGGATGCCCTGGTCTCCATGTCCTGATACTTGTGACCCTGGTAAGCAGGTCCGCGTTCGCACCG
TCCGAGGTGGTCCGAACTGCGGTCCGTTGCAGGAGACACGCGACTGTCCCGTTTCGAGGTCGTGTCGTTCCCGTGAGGCT
GTCTGGGTCGCCGGGGAGTGGAGTACCTGTAGATTACCGCCAGGACAACGCTGTGGAGTTGGCTATAGGATTAGAAGTAT
CTGGTGCGGCTCGGACTCTCACCGCGTCGAGGCCGGCGCATGTGCTGGTGCCCGGGTGCCGCCCGCTGCAGCAGCCTGCA
GCGTCACATGCGACACCATCGTACCACTCACTTGTGATATCATATGTTCAGATCCCCTAAAATACTTGGATGCCTCTGAC
CCCGACGTACCCTCATGCGTCTGCAAGAATGTCTCATTGGAACTGTTACCCGCTGATTCAGACTGTATTCTTCCACCTGG
AATTGAATGCGGTGAAGGGAGATCACTGCGGGCAGCTCGTTGTTTAGTTGGAAGACGTGATGTACCCATGGATGTTTGTA
GGAAATACCATCCCCTTACAGGACCCCGTCGCGTTCGTGAAGCAGCAACAGACGGCTTCACATATGATGAGGAATTCACA
TCTTTATTACGCGGTGCATGTAGCGTGCGGTGTGCGAGGGACTGTGCGGTCGGGGCGTGGGCTGCCTGGGGACCGTGTGC
TGCTGAGCCGGGTTCCAGAGCTGCTTTCAGGTTCCGCACCAGGGAAGTAATAGAGGAAGGTTCGGCTGGTGGTCGTGAAT
GTGGCGCCACATTGCAGCGCTCTACGTGCGTTGTGACTGAGCCACGATGGATACTGGGCGAGTGGTCTGTGTGCGCTCCG
AGACGAGCTCTATGTGGACGAGCCATTATCAATAGGACTGTTATGTGCATAGATGCGGATGGGAATAAATTGGAGGACAC
ACAGTGTGAGGCGGCCGGCGCTGGTCCTGCGCCCTCTCGCGATGCGACATGTCGGGCTCCGTGCCCTTCTGACTGTGTTG
TCAGCTCTTGGTCAGACTGGAGTCCATGTGAACAGACGAAATGGGGCGGTCGTCGTGATAGGACTCGTGTGGTTCTCCGC
GCGGCTGCTGAGGGCGGGACTGCCTGCCCTCACCTGGTGGCTGCGGAGCCTTGTTCACCGCACGCCTACTCCTGGCACGT
GGCACCCTGGGATGACTGTCAACCGCTGGGTGGGTCTCCGTGTGGGGAAGGAACAAAGAGAAGAGCTGTACGGTGCCTTC
GCAGCGATGGTGTTTTCGTAAATGATTCATTCTGTCCGAACGCAACGGCATCCGAGGCTCGGGAGTCATGGTGCTACGTT
CCATGTGGCGTAGACTGTGAGGTTGGAGAGTGGGGACCTTGGGACGCCTCCGCCTGCTCCTGCGGGGACGCAGTCACAGC
ACGCCACATGAGACGGATACGTCAACACTTGACGGCAGCTGTATGGCCGGGTCGCGCGTGCCCTCCCACTGAGCAACGAG
CTCCCTGCCCGCGAGAACCATGCTTGAGACTCGTCGCTAGACCGCTATTAGGATGTCATGTACAAACGTCATCAGGAGAA
GAAGCTGATAATGCATGCGGATGGGGAGTGAAGTTATCTCATGCAAGATGTGAACTGACTAGCATCAACGATGAACCGTC
ATCAGGAGCCTTCTTACAACCCTGGAGATGTGCCTCCGCTCTACCGGGACGTATCGTTACACCGCCAATGCATCATCAGG
AGGACGAGGAGTGTGAGGTCGAATGTGGATGCCAGGAATCTGAGCTGGGGCAGCCGGGTCCGTGGGGCGCTTGGGGCGGC
TGCCGTGGTGGGGCACGTTCGAGGACACGTACACTACTGGTACCACCCCGAAGAGCCTGCAGAACATCCTCCAGATACAT
AACAATCGAGTGGTCGAACTGCACCGAGGAGGCTTCGGAGGCGACAGCTGGTGGTGACGGAACGCGAGGCGCCTGGCTTT
CAGAACACTACCATGACGGATATATAGAGGGAAGTACTTCAGTGTTGGCGGTAGTGTGGACTGCGACCATAATACTCAGC
TTGTATGGCGCGTTCATGCTCTATCGTGGACTTCTAAGATGCATCAGAAGCAGAAAAATGAAGAGCATCACTAAAGTGTA
A
PEP:
>DPOGS200340-PA
MSVRQPVVIEGEYTVYVGTWTECSTGDGDQAKSFDRYNARLESDSLVHTPRLGLQRRQVQCRRKDGRFVEALYCGIAIAN
IGTTRVCVMREDCSLAEWLPWRPRSDGALVRTRRLRRLSQGGGKECDVVEEVRPTVLETTAHWTPGPWGPCRVAVEQAAT
AAPTDDDDDADDNDAIYDEDDESDESEQSSCGGGVQRRAATCVRADGRALHDAQCAHAVMPTLVQPCEVPCPRDCEVGEW
SEWGACQPTDGCPLYPVQQLTTTGYSVRRRRVTAAASGGGAPCPPLEEKRTCTTPRCAAWKALPWGPCVLTQPHTSCGPG
RRTRELRCMGHDGKEAQRAWCNTGAPPRSERCRIACPGDCVVSAWAEWSPCSASCVAPGHARPTRTRRRHILAHAAPNGW
PCPSEDQLIQNETCNTHACATYSWLATPWGPCERRRQDFIPATNYTDLLDNEPFNESDDEEPCIEEGEMSRDVMCVQNNA
DVVREALCAPLRRPASRRACTVRCRRGCRVEAWMPWSPCPDTCDPGKQVRVRTVRGGPNCGPLQETRDCPVSRSCRSREA
VWVAGEWSTCRLPPGQRCGVGYRIRSIWCGSDSHRVEAGACAGARVPPAAAACSVTCDTIVPLTCDIICSDPLKYLDASD
PDVPSCVCKNVSLELLPADSDCILPPGIECGEGRSLRAARCLVGRRDVPMDVCRKYHPLTGPRRVREAATDGFTYDEEFT
SLLRGACSVRCARDCAVGAWAAWGPCAAEPGSRAAFRFRTREVIEEGSAGGRECGATLQRSTCVVTEPRWILGEWSVCAP
RRALCGRAIINRTVMCIDADGNKLEDTQCEAAGAGPAPSRDATCRAPCPSDCVVSSWSDWSPCEQTKWGGRRDRTRVVLR
AAAEGGTACPHLVAAEPCSPHAYSWHVAPWDDCQPLGGSPCGEGTKRRAVRCLRSDGVFVNDSFCPNATASEARESWCYV
PCGVDCEVGEWGPWDASACSCGDAVTARHMRRIRQHLTAAVWPGRACPPTEQRAPCPREPCLRLVARPLLGCHVQTSSGE
EADNACGWGVKLSHARCELTSINDEPSSGAFLQPWRCASALPGRIVTPPMHHQEDEECEVECGCQESELGQPGPWGAWGG
CRGGARSRTRTLLVPPRRACRTSSRYITIEWSNCTEEASEATAGGDGTRGAWLSEHYHDGYIEGSTSVLAVVWTATIILS
LYGAFMLYRGLLRCIRSRKMKSITKV
Swiss-ProtThrombospondin type-1 domain-containing protein 7A
SUPERFAMILYSSF82895  TSP-1 type 1 repeat superfamily     
Gene3DG3DSA:2.20.100.10     
PfamPF00090  TSP_1; Thrombospondin type 1 domain     
SMARTSM00209     
ProSiteProfilesPS50092  TSP1; Thrombospondin type-1 (TSP1) repeat profile.     

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