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Gene detail [Fasta]

Species Danaus plexippus
GeneDPOGS208661
PositionDPSCF300281:249917..259125[GBrowse]
MonarchBasehttp://monarchbase.umassmed.edu/tools3/Get_gene.cgi?id=DPOGS208661
sequence mRNA:
>DPOGS208661-TA
ATGGATAGTTCAACTCCGTTTCAACCTTGGTCTAGTGACGATAATTCAAAGAATGTTAAATCTGAGCGAGAATTAGTAGA
TGACGCGAAACTTCATCGGGAAAATGTCAATCATCCAAAACATAGGCAAACTGCGTCTTACAATAAAGAAAGTGTCGTCG
ATCCTAGCGTCGTTCCTGGACCATCGAGTGCCACGGACACCGATGTCCATCCACTCGGCGGTAAGGAGTCAAAAATGGAC
TCCAGCAAAATAGCTTCCATGCAACAAATAGTCGAGAACACACTCAGTCAAGAGGGCCGTCAAAGAGTGTCACAATTGTT
GGAAGCTGTAGAGGGTCTCAGTGGTGCGGAGAGATTGTTACTTTATCTCCGTCTACCAACCGGTGTACCTCCACACGATC
CCCTCAAACAGCCAGTCAATCCGCTGGGCTCCAGAGCCGAACTACAGCAGACTGTAACGTGGATACAAACACACTTGGAG
GTTGATCCTGACGTTTCGTTGCCAAAACAAGATGTTTACGATGAATACATAGCTCATTGTATGACCAGCAATATGAAACC
ACTATCGACCGCTGATTTCGGCAAAGTCATGAAGCAGGTGTATCCTAGTGTGCGCCCGCGCCGGTTGGGAACGCGCGGCA
ATTCAAGATACTGTTACGCTGGTCTCCGGAAGAAAGTTAAACTTGAAGTGCCACAGTTGCCAAATTTGGGTGAATCGACC
AAGGAACCAAGTGTGCCTTCAAGAGAAAATGAAAGAATCATTTGTGATTGGGCTGAATCTAAATTGGGCGTTAAGTTCAT
GAACATATCGGAGTTATCTCGTCACCTGTTAAGCGCGATGCGCGCCCCGCCCGGTCCGACCAGCGCCACACCGCCGCCGC
AAACGCATGGATCTGATGAACCACCGGGACCACAGTTAATGAAACAACAGTTAAAAAGAAAGCTACAGACGCAGGGTACG
GTGGGTCGACCGAAAAAGAACAAGGGGCAAGAAGTCGCCGGGGAATCGCCGCCGTCCACTTCATACGTAAGCCATCCCAC
AGTGAAACATGAGAGCGAACTGGTGCCCGAATCGTACGGCTATCAGCCGGCTTACATGCCCGTTTATGACGTACGGCCGG
CCTTTCCCTATGCGGCGCCACCTCGTGCTCACCCCCCCCATCCTCTTCCCCCACACCCTCATCCCCCACCACCGCACCCG
CCCGCCATCCCAGTACACGATTACCGGCCCGATCCTTACGTCTTCGAACCGCCATATGCACCACGCGACCTTACTCTTCC
GGACACGGCCCACAACGTACCGATTAACCTCAGCAGTGATGTTTCCCTCGACCTGTCCACCGAGCGCACAGAGTGGCAAC
GTCGCCGTCCCCCGGACCCTCCGGCTCCGACCGCCCGTCTTCCGCTGCCTGGGAAGAAGTTAATCTTGGAGACGTATCAG
AGCGAGACTCAAGCTAGCTCCCCTCGCTCGTCACAAACTGACACGCGAGCCGTCCACCAGCCGCCAGAAGAATTTCCGCG
CACGGAATACTTGCCTAAGAAGATGCGTGCCGCTGAGATACTGGGCGGTAAGTTGGCGGCACCGAGACAGGTCGCCGCTG
CGGACGCGTCGACGTCATCATCGACAGGGGCGGAATCGGCACGTTCCGAGGTTGCTTTTTTAAAGGATCCAAAAAACTTA
ACGAACCGGTCCAAAAGCACCGCCGCGGCGCTGGCCCGGGAGGAACAGGAGGCGGCGAGTCCGACACGGTCGGTGAAGGC
TCCGACGCCTAAACACAATCGAACTAAACTGAGAAAGTCGTCACACATGAGAACGAAGGGGTCGTCTCCGGAGAGGAACG
AGCACGACCATTCCGCGGCGCCCGATACCTGTTGTGGTATTAATGGCATCAATATTATTACGGGAATGATCTGTGGGGAA
AAACATTCTGAGATACTGAACCGTGAACGAGTTATTAGCATCTGTAATATCGATAAACACGATTTAGACGATTATCTCAA
TGAGGGCAATAGCCAGGAACACGAGGAAGAATTAATGCAATACTTCCATCATCGCGATGGTGACACAGATATACCAGCAA
AATCTAATCAGAACGAAAATACGACTTTTTTAGAAACAAGTCAGGACCCACACGACGAACATAGTCAAGGGAAAAGTGAA
AAAATATCGCAACTGCGAGAACTATTAGCTAAGAATTTGAAAAGTGGGTCCAATACACAGAATTTATTATTAAATCAAGA
AAAACAAACTCCGATTAATAATAATCACGAAACACATGTTAATAAGAGTTCAATATCGGACGGAGCATTTAGGCCACTAA
ACAACGTTATGGAAATGATAAACGGCTCCAATGGCTCAAACGAAAATGAAAATAATGTAAGGAAAAAATGTGATAATATT
CCAAGTGAAAACGGAATTTCCGCTTGTGCCCCAGAGAATTCACACACTCAGGTGATGACAACAGCGACTGGTTCTCATCT
TTACAATGGTAACAGTCATACGGAACCACAAAGTCCAACTACTAGAACACAACAATACGATTTCGTACCTATATCCGATG
GATGTCATTCTCCTGGGAATTTTAATTCAAAGTCTCCTTTAGGTTTTGGACAACGAGGGCACAGTCCAACTAAAACGAAT
AAACCTATTATAATGGGTGGTTCCTTGCAAACATCTCCTATTTCACATAGCATGGCAGCAAGTCCTTTTGTCAGTCCAAG
AAATACTCCGGTGCCAAGGTCACGCTATTGTTCTAGACCAATACCTAAACACAACAATAGAAAGAGACGTACCATTTTGT
CACTCGGTGTAAATGAGACTGGCACTAAACAATTCGCAATACCAAATGATCAGAAATTCCTGCCGAAGTCTTCTTTGGGT
GGGCAGAATATAAAATATTGCCAACCAATGTCAGCACCTCCATCGCCCAACCTCCTACCACACTTTAAACAACAAATGAT
ACAAAATTCCGTGATACCAAATGGCACCAGTAATATGTGCTTTGTGTCAAATACGTTTCGAGAGAATGTTAATGGTGAAA
TGCCACAACCATTATCAGCAGATCCGTTGTCCAGTGAAGTGAGTCAATTTTTTCAGGAGCCTGTAACGGGTTATAGAATA
GCTCACGATACATCTTTTAGGTCACAATCGGTACCATTGAAACAGGCAACCATAAACATTGGCTTGTTGAGCTACAACAA
TACACCAGTCGGTTCCGTCCCACCTACACCAGTACCGAATGAGTTTTGCGATTTTGGTTCTTTAGCTGACACATGTGATA
TATCTAGGGCAGGACTCAATCCTGAGACTCTAGATAAAATATACGACGCTATTGATAGCAGCAATGACGTACTTAACGGT
GGCACGAGTAATAACATATTAAACTCCAGCGACACCCTAACTAACGGTTGTGATCCTTTACCCGAACAACAAATTCTGAT
AGATGAACAGTTAAGTTCACTTATACCTAGCGGGGAAGAATTGCTCGATAGGAGCTCCCTTATGGCCAGCGGAGAAGACT
TACTCGAAAGGGGTGAACAATTCAATGAGTCGTTTCCCAATGACTCGACGGCTTCAGAGAATGTGGAAGAGTTCTTGAAA
CGTACAAACAGCATAGAATTTGATTTATCTGATTTGGTAACAGAAAAAAATAAATACTACGCATCACGTTCCGTACCAAG
TACGCCATTGCCTTATAAGCGAACGGCTTCGAACTTACAAATAGATCCACGGCACGCTAGAGATCTCTTCGCTACCGAAA
ATTATTCCAGTGTATCGAACGGTATATCTTCAAAATCCGTGCCATCTACACCACAATTAGCGGAAGATCGCAGTGTTTTT
AGTTACACCAACAGAGACTTTCTCATTAACGGAAACTCGGTTGACATGTGCTCTAATCAGATTAGGCAACCGGTTGAAAA
TGACCAAGCCTTGACGTCCCCACTTGACGAAATACTAGGTCCTCTAACGCCAGCCGCAGATCTATTGGCTGACCTCGACA
AAATAGATACTGCTCCATATGTTGACCTCTAG
PEP:
>DPOGS208661-PA
MDSSTPFQPWSSDDNSKNVKSERELVDDAKLHRENVNHPKHRQTASYNKESVVDPSVVPGPSSATDTDVHPLGGKESKMD
SSKIASMQQIVENTLSQEGRQRVSQLLEAVEGLSGAERLLLYLRLPTGVPPHDPLKQPVNPLGSRAELQQTVTWIQTHLE
VDPDVSLPKQDVYDEYIAHCMTSNMKPLSTADFGKVMKQVYPSVRPRRLGTRGNSRYCYAGLRKKVKLEVPQLPNLGEST
KEPSVPSRENERIICDWAESKLGVKFMNISELSRHLLSAMRAPPGPTSATPPPQTHGSDEPPGPQLMKQQLKRKLQTQGT
VGRPKKNKGQEVAGESPPSTSYVSHPTVKHESELVPESYGYQPAYMPVYDVRPAFPYAAPPRAHPPHPLPPHPHPPPPHP
PAIPVHDYRPDPYVFEPPYAPRDLTLPDTAHNVPINLSSDVSLDLSTERTEWQRRRPPDPPAPTARLPLPGKKLILETYQ
SETQASSPRSSQTDTRAVHQPPEEFPRTEYLPKKMRAAEILGGKLAAPRQVAAADASTSSSTGAESARSEVAFLKDPKNL
TNRSKSTAAALAREEQEAASPTRSVKAPTPKHNRTKLRKSSHMRTKGSSPERNEHDHSAAPDTCCGINGINIITGMICGE
KHSEILNRERVISICNIDKHDLDDYLNEGNSQEHEEELMQYFHHRDGDTDIPAKSNQNENTTFLETSQDPHDEHSQGKSE
KISQLRELLAKNLKSGSNTQNLLLNQEKQTPINNNHETHVNKSSISDGAFRPLNNVMEMINGSNGSNENENNVRKKCDNI
PSENGISACAPENSHTQVMTTATGSHLYNGNSHTEPQSPTTRTQQYDFVPISDGCHSPGNFNSKSPLGFGQRGHSPTKTN
KPIIMGGSLQTSPISHSMAASPFVSPRNTPVPRSRYCSRPIPKHNNRKRRTILSLGVNETGTKQFAIPNDQKFLPKSSLG
GQNIKYCQPMSAPPSPNLLPHFKQQMIQNSVIPNGTSNMCFVSNTFRENVNGEMPQPLSADPLSSEVSQFFQEPVTGYRI
AHDTSFRSQSVPLKQATINIGLLSYNNTPVGSVPPTPVPNEFCDFGSLADTCDISRAGLNPETLDKIYDAIDSSNDVLNG
GTSNNILNSSDTLTNGCDPLPEQQILIDEQLSSLIPSGEELLDRSSLMASGEDLLERGEQFNESFPNDSTASENVEEFLK
RTNSIEFDLSDLVTEKNKYYASRSVPSTPLPYKRTASNLQIDPRHARDLFATENYSSVSNGISSKSVPSTPQLAEDRSVF
SYTNRDFLINGNSVDMCSNQIRQPVENDQALTSPLDEILGPLTPAADLLADLDKIDTAPYVDL
Swiss-ProtDNA-binding protein Rfx5
SUPERFAMILYSSF46785       
Gene3DG3DSA:1.10.10.10     
PfamPF02257  RFX_DNA_binding; RFX DNA-binding domain     
ProSiteProfilesPS51526  RFX_DBD; RFX-type winged-helix DNA-binding domain profile.     

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