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Gene detail [Fasta]

Species Danaus plexippus
GeneDPOGS216174
PositionDPSCF300155:303768..321343[GBrowse]
MonarchBasehttp://monarchbase.umassmed.edu/tools3/Get_gene.cgi?id=DPOGS216174
sequence mRNA:
>DPOGS216174-TA
ATGGCAGTTCTCCTGTTATTATTTTCGTTGCTGGCAGTCTGTTCCGCGCAGTTTAAGGATGACTTGCAGACTTATGAGAC
GGAGTGTCTCATGGAAGGTTCATTTTCTTGTACATCAGGAGCGTGTATACCGTCGGAGAAGTATTGCGATGGGTATAACG
ACTGTGAGGATGGAGGCGATGAGAACTTTTGTGCCAATCACCGTCCAGATGCTCACTTGTGTAACGAGACTCACCAGTTT
CTATGTACGGACGGGTTGATGTGTCTACCGAGCTCTTGGGTGTGCAACTATGAGAACGACTGCAAAGATGGTTCCGATGA
AATGGGCTGTGAAAAGATAATCCAACATGATAATTCATCATGCAAAGGTTTCCAATGCGACGGCGGGAAGCTGTGCATAT
CAGATCTTTGGATGTGTGACGGTTATTACGACTGTGCTGATAAAACAGATGAAGACGTCGTGGACACTTGTCATCATGCA
CCTCGTCCGAAGCATCTTCATGATACACTGAACTGCGAGGTCAGATCTATGAACTACACGTGCTTGGATAAATCGTACTG
CATACCGTACAATAACATGTGTGACGGTCTGAAGGATTGTAGAGACGGTAGTGATGAAGGGGCATTTTGTGCCGAATGGT
CCAAGATGTGTGCAAACAGAACCTGTCCCAGGGAGTCGTTCTGCAAGCCCACTCGTAATGGTGGTACTTGCGTGTGTAAC
TCCTACAAGGAGTACAATCCCAGCAGTGGGGAGTGCGAGCGTTCCCGACAGTGTCTCCAGGAAGTGCCCGTCTGTTCCCA
CATGTGTGAGGATATGGGGGACTACTTCAAATGCACTTGTGAAGATGGATACAGATCTGATCATGCTCAGTATCTGTGCT
TTGCTCCTGGTCCCGAAGCGATGTTGTTCTTCAGTACCCAAAACTCTATACAGTATGTGACAGTCAAATCGAATCATAGC
GTCACCGTGTTGACTGGAATCAAAAAGGCCCACGGTGTTGCATACGATGGCAAATATTTATACTGGGTCGAAACAGAAAA
AGGACATCAGGCCATCATGAAGGCACAGCTAGAAGACGTCGCTGGAACCAAACAGGTGCTGGCTGCCCTGGGTCTTGAGG
ATCCGGGAGATATAGCCGTGGACTATCTCGGTGATAACATCTACTTCAGTGACACAGCACGCGGCTGTATCACTGTGTGT
CGGACTGATGGCGCTCTGTGCGTCACGCTCGCCGCACACACGAGGAGACCAAAGTTTGTTACACTGGATCCAAGGAAGGG
CGTCATGTATTGGGCTGATAAGCATGACAAGCCGGTTATAATGAAAGCTAAGATGGATGGCTCGGAGTCGGAAAACCTTG
TGCACGAGCTGAGTACTTTTGCGAAAGGCCTTGCTTTGGACGCACCGAACGGAAGGTTGTACTTCGTTGATGGAACTATT
AAAGTTGTTATACTGAATGATAAGAGAGTTTATTCCTTTTTCGAAGAGCAATTCCACCATCCGTACTCGCTGTCAGTGTT
TGAAAACACAATATTCTGGAGTGATTGGACTTCCAGGACGATACAGACAGCAGATAAAATACACGGCACTAGCATCAACA
GGAACATTTTGCTGACCCTGGATACGCCGGTGTTTGACATGCACCTCTACCATCCGATCCTCACGAACGCAACCCACAAC
CCGTGTTCGTCTCGCTCGTGTCCACTCTGCCTTATAACATCCAACACGAGCTCTGTGTGCGCCTGTCCAGATTCTATGCG
AAATGTTAAAGGGCATTGCGAATGGATACCCGGCTATCGTCCTGATTACTTGTTGGTAGCATCAGGGTCAGCTTTCATCA
GAATATATTATGATACTGTCGGAAATCCCGAGACCCACTCGACTGTCCTCGATATAGGAAGGGTCCAAGCCATGGCCTAT
GACAATTTTAGAGATACTCTTTATATATACGATGGTCAACATAAGTCTATCAACTCTATCCTTATGAGCGACTTTTCCCT
CGGCGTTACTCACCTTTTTATGTACAAAGGTCTTGAAAATGTTGTTGATATGGATTATGATTACGTATCCGATTCTTTAT
ATATCTTGGACGCTGGTCGTCGCGTTATAGAAGTGACTTCACTGAAAAACAAACACACAGCATTACTATATCGATTTAGG
GAAGAGGAAATACCCATAAGTTTTTGCGTTTTGTCAGCGTACGGACGTATGTTAGTTGCTGTCTTGGATACCGATAACGA
TATCATCTACATAGATTCATTCGGACTCGATGGTGACGATCGTAAACACATAGTTACAAATAATACACGTGGTCCAAATA
TCCGGATGAGGTACTCAACCGATCTGGATGTAGTATTTTTATCTGATGATCAAAACGGAGTAATTGACTTTCTACATCCA
CAAGGTACTGGTAGAGAGAATTTCCGTGAAGTTGTAACAAATATCGCTAGTCTCGCTGTGACCGACAATCAAGTGTTCTG
GACGGACAAACGGTCGACCAAATTGTATTGGGCGGATATGCATGATGCGACGAGGAAGATACGCAGAATAGAATTATCAA
TATTTCCAAACACCACACATCTGGTTATTCTCGCTACTTCACCCCTTCCTAAATCACATGGTCACACATGCTCCAACTCG
AACCCCCCTTGCTCCCATATTTGTGTGCAAAAATCGCACGAATACGTAAAACCGGGATCGATTGATTCAGCGCCTTTGCA
GTACACTTGCTTGTGTCCCGTCGGCTTCATAAATAATAATGGGATTTGTTACGAAGTCACAAAGTGTAAAGAGCACGAGT
TTTATTGTCATAAAAGTAATCAATGCTTTGACGGTAGCAAGAAATGCGATGGTACTGAAGATTGCAAATTTGGTGAAGAC
GAAGAAGGGTGCTTGATTAAAGGAACATATTATTTGAAAATATGTGAAGATGACGAAATCGATTGTCATGGCATTTGTAT
TCAGAGAACTGAAATCTGTCGGAACAATACCACAAAACAGTTGTTAACGTGCGGTTCCTCTGAATTCCGTTGCTCGGACA
ACTCTATATGTATAGAGCGTGCGCTCGCGTGTGACGGCCACGCGGACTGTAGAGACGCTTCTGATGAACACCCAGACGCC
TGCGATACCAGAGACTGTGGCGAATTTGAATACATGTGTGCTTCAGGATCATGTATACCACTCACGTGGAAATGTGACAA
ACACGAAGATTGCTTGGACGGCTCCGATGAGATCAGCTGTGAGAGCAGAAGCTGTCCGTCCGGTACCTTTGAATGTGATA
CTGGATGTGTCGAGGTTTACAAGAGATGTGACGGAAAATACGACTGCGAAGATCACGAGGACGAAAGGGACTGTGATGAA
CCGGAGTTTGCTGGAGTTATTGACTTCTCGTCGTGCGCTCCGTGGGAGTACAGATGTGAGCACAACAAGTCAATTTGCTT
GCCTCAAACAGCACGTTGCAATGGCCGCACAGACTGCCCGGGTGGTTCGGACGAGGCGGGATGTAACTTCCAGTGCGGGG
AACTGTTCCCGTGCACTCAGGAACATTGGTGCGTGTACCGAGACCAGCTCTGTGATGGCAGGCAGGACTGCGCTGACGGA
TCCGACGAGACCTTCGACGTTTGTGCCAGAGCCAATAAAACAAGACCTCTGACACAAACGCCGCCAACACCTTGCGAGGA
CTACCGCTGTGATGATGGCCAGTGCCTGCCGTGGGAACACGTGTGTGACGACAAGACTCACTGCCGGGACGGCTCCGACG
AGAACGGGCTCTGTAACAGTACTTGCGCTGCTGGGTGTATATCTCGGCGTACTCCCCGCGGCCCGCGGTGCTCATGCAAG
AGTGTCTGTGAGGAGTGCTCGCACACGTGCCACACTGACGGGGAGACGTCCGTGTGCGCCTGCTATAAGGGATACGGACT
TAGATTGGACCGTCGCTCGTGTAAGGCGCTGTATGGGGCTCCGGCCACCTTATACTCCCGGGGGGGTGCAGCGTGGTCAT
TGACCTCTCACGTTCATACAATGCTATATCACGAGGGGGAGGAACTCAGCGACTTGGATTGCGATGTCAGGCGAGGCAAG
TTATATTTTACTTCGAGTGAGGTCGGTAAGCTGATTGAAGTGGACAACAAAAGACAGCCGCCAGTAAAAAGCATAACCAA
CATAGGGAGACCTGGCAAGTTGTCAGCGGACTGGATAACCGGTAACGTGTACTTCGCGGACAGCACTCCGTCCCAAGGCT
CCATACGAGTTTGTAATTTCAAAAAGCAGAAGTGCGCCAAATTACAGAAGATACCCACTGATGTGCAGGTGACAGCCCTA
GTTACAGACCCCGCTAATCACCTGTTATTCTACTGTCTATCTGACTCTTCTGAATCTCACATACGCTCGTCCTCGATGTC
TGGTCGCTCTCCGTCCGACGTGGCCACGGTTCCAGCTTGTCTGGGCCTCGCTGTGAACTCCTTCAGCAAACTCCTGTATA
TCAGCACGCCATCTTCTATCATGAAGGTCGGCTATGATGGAAGCAATCTCATAACTCTCATAGACCACCCTATAAGCACA
CCTCACCTCGCATTCTTCGAGGACTACATATACTTCATACACAATTCCCACGTAACCCGCTGCCTGCACTTCGGCCCCAA
AACCTGCGAGACCCTCAGCCACGTGTACAACGCCTCAAACTTCGTCCTAAGTCACGAGAGCATACAAAGAGATGACGTCA
TCAACTCGTGTGACGTCACGGAGTGCGGACACGTGTGCGTGTTGGATCGTGTAGCTGTGTGCGTGTGTCATGATGGCAGT
ATAGTTAGAGATGGAGTGTGTCCTGGGGACAGGGCGGAGGAGCAGGCCGTGTTCAGTGACGGCTCCCATTCCCACGTTTG
GTCCTTAACATTTCTGTGGGTGCTGTTGCTGATGCTCGCGGTGTACGCGGCCGCGTTTGTCCACTACCGCCTCTACAGGA
AAAACAAGACGCCAGCCGAATATATACAAGTCAGATATCACAACACCTCAGAAGGCCTGACTCATCTTTCGCACCCAATC
ATCGACGTCCCTGAAGCCGGAGCAATGAGCCACGAGTTTGTGAACCCACTGCAATTCGTAAGAAATTTTTGGCGGGAATC
CTTCGAAAGACAGAAGCCGATCGGTTCAAATGTCATGTACGAAGAACAGCAGGATCCATCGGACACGGAGTCCGATCTCG
ATGTGAGAGAAACAAGGAGAATGATCAAATGA
PEP:
>DPOGS216174-PA
MAVLLLLFSLLAVCSAQFKDDLQTYETECLMEGSFSCTSGACIPSEKYCDGYNDCEDGGDENFCANHRPDAHLCNETHQF
LCTDGLMCLPSSWVCNYENDCKDGSDEMGCEKIIQHDNSSCKGFQCDGGKLCISDLWMCDGYYDCADKTDEDVVDTCHHA
PRPKHLHDTLNCEVRSMNYTCLDKSYCIPYNNMCDGLKDCRDGSDEGAFCAEWSKMCANRTCPRESFCKPTRNGGTCVCN
SYKEYNPSSGECERSRQCLQEVPVCSHMCEDMGDYFKCTCEDGYRSDHAQYLCFAPGPEAMLFFSTQNSIQYVTVKSNHS
VTVLTGIKKAHGVAYDGKYLYWVETEKGHQAIMKAQLEDVAGTKQVLAALGLEDPGDIAVDYLGDNIYFSDTARGCITVC
RTDGALCVTLAAHTRRPKFVTLDPRKGVMYWADKHDKPVIMKAKMDGSESENLVHELSTFAKGLALDAPNGRLYFVDGTI
KVVILNDKRVYSFFEEQFHHPYSLSVFENTIFWSDWTSRTIQTADKIHGTSINRNILLTLDTPVFDMHLYHPILTNATHN
PCSSRSCPLCLITSNTSSVCACPDSMRNVKGHCEWIPGYRPDYLLVASGSAFIRIYYDTVGNPETHSTVLDIGRVQAMAY
DNFRDTLYIYDGQHKSINSILMSDFSLGVTHLFMYKGLENVVDMDYDYVSDSLYILDAGRRVIEVTSLKNKHTALLYRFR
EEEIPISFCVLSAYGRMLVAVLDTDNDIIYIDSFGLDGDDRKHIVTNNTRGPNIRMRYSTDLDVVFLSDDQNGVIDFLHP
QGTGRENFREVVTNIASLAVTDNQVFWTDKRSTKLYWADMHDATRKIRRIELSIFPNTTHLVILATSPLPKSHGHTCSNS
NPPCSHICVQKSHEYVKPGSIDSAPLQYTCLCPVGFINNNGICYEVTKCKEHEFYCHKSNQCFDGSKKCDGTEDCKFGED
EEGCLIKGTYYLKICEDDEIDCHGICIQRTEICRNNTTKQLLTCGSSEFRCSDNSICIERALACDGHADCRDASDEHPDA
CDTRDCGEFEYMCASGSCIPLTWKCDKHEDCLDGSDEISCESRSCPSGTFECDTGCVEVYKRCDGKYDCEDHEDERDCDE
PEFAGVIDFSSCAPWEYRCEHNKSICLPQTARCNGRTDCPGGSDEAGCNFQCGELFPCTQEHWCVYRDQLCDGRQDCADG
SDETFDVCARANKTRPLTQTPPTPCEDYRCDDGQCLPWEHVCDDKTHCRDGSDENGLCNSTCAAGCISRRTPRGPRCSCK
SVCEECSHTCHTDGETSVCACYKGYGLRLDRRSCKALYGAPATLYSRGGAAWSLTSHVHTMLYHEGEELSDLDCDVRRGK
LYFTSSEVGKLIEVDNKRQPPVKSITNIGRPGKLSADWITGNVYFADSTPSQGSIRVCNFKKQKCAKLQKIPTDVQVTAL
VTDPANHLLFYCLSDSSESHIRSSSMSGRSPSDVATVPACLGLAVNSFSKLLYISTPSSIMKVGYDGSNLITLIDHPIST
PHLAFFEDYIYFIHNSHVTRCLHFGPKTCETLSHVYNASNFVLSHESIQRDDVINSCDVTECGHVCVLDRVAVCVCHDGS
IVRDGVCPGDRAEEQAVFSDGSHSHVWSLTFLWVLLLMLAVYAAAFVHYRLYRKNKTPAEYIQVRYHNTSEGLTHLSHPI
IDVPEAGAMSHEFVNPLQFVRNFWRESFERQKPIGSNVMYEEQQDPSDTESDLDVRETRRMIK
Swiss-ProtVitellogenin receptor
SUPERFAMILYSSF57184  Growth factor receptor domain superfamily     
Gene3DG3DSA:2.10.25.10     
PfamPF00057  Ldl_recept_a; Low-density lipoprotein receptor domain class A     
SMARTSM00135     
ProSiteProfilesPS50068  LDLRA_2; LDL-receptor class A (LDLRA) domain profile.     
PRINTSPR00261     
ProSitePatternsPS01209  LDLRA_1; LDL-receptor class A (LDLRA) domain signature.     

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