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Gene detail [Fasta]

Species Atta cephalotes
GeneACEP12493
Positionscaffold00023:3207443..3213460[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/acep_10/?name=ACEP12493
sequence mRNA:
>ACEP12493-RA
ATGGACTACGATCTGTTTGGTGAAGATGTCAGTGGCTCGATGCTCGAGGCTCTTCCTGATCTCGGAGGGAACGATCACTT
CGATCCTGCGCCTGCGAATAATTCCGTAGCGGTGTCCAGAGACGGTCTGAATTCCGGCCCTAATGGAGGAGGGAGTTACA
TTAACCAATCTTATAACATTTCTCAAGAATCTCCAATACAAAAATTAACCTCATTCGGCGGATCTGAATTTGGTGGCTCG
AATCAATTGCAAAATCCGTCGCAGCGCAGCATGTTTAACCAAAATCTCGGTACGTTCGATAATAGCGCCACACCTCAGCG
TGCTATGGTGCCGGGCGCATTTCAAAATCAGACTCGTAACATTGCACCGCAACAGCATAGGGGGCCTCATCCGGGTACCG
GTGGTCAGTATCCTAGTTACAATGACAATATGTATTCTATGGAGCAGCAACACTCGATAGCTAGAGCCAACATGAGTATG
GATCCTAGCCAACAAGGTTGGCCGGGTAATGGAACTGGTTATCCACAGATGCAGAGGCATTACAATCAGATGGCTCCGCA
GCCTGCCGCATACAGGCAACACATGCCACCACAGTATTCTCATCAGCAAGATCAAGCTGGCGTTATTAATCAAAAGATGC
AGCAGCAACAGCAGCAGCAGCAACATTTTAGTCAACAAGGGATGATAGGCAACATGGGAGTTTTGCATCAATCGATGCAA
CCTGGAACAACTGGTGGGGTCTATCAGCATATGGTTGGGCAGCAACAACATTACCAGCAAGGTAATACGGTAGCAGCGAT
GTATCAGACGACTCCCGGTTATCCTGGTTTCGCTTCGGCGATTCATCAGCAACAGCAGGCTCAACAACCACCCCAGGCGA
GAATGCCGCATCATCACCCGGCGCATCCGACGCATCAACCACATCCGTCTCATCCTCAACAATATCCTCAGCATACTCCT
CAACATCCGAATACGCAACAACAACCGACGATGGATCCTCAATATCCTCATCATGCCACATCAATGTTTAATCAACCTCA
ACATTCGGCGCCGCCACAGCAACAGTTCGGCACAGCACCGACTAAACATTCGACAAGTCCACAATATCGCGCTGCGTTCC
CACAGTTATCACCACAAATGTCGCCACGGCCACAAATGTCTCCGCGTCCACCGGCGGTGCAGCAGCAAATGTCACCGCGA
CCCATTATGTCGCCTGCCAAGCCTACCACGCTTTCGCCGCATCCTCATGTTCAACTTCCTCATCAACAAGGCAATCAGGC
TAACGCGATGTCAGTGTCACCTTCGTGTCCGCCCACATCTATGCAAATAAATCCATCATCGCAGCAACAGCAGACTACTC
TGCAGGCTCTCGAACAGATGGTGATGCCGGGAGTTGCTGTGTCGAATTCCAGCGTTCCCACTTCGGATCAGTATAATCAG
TTCCAAACACGTCCGCCAATGTCGCAGACACCGAATGTTCTGCCGCAGCAACCGACGGCGCAGAGTCCGATGCCAGGCCA
AGTCACGGGGCCCAGAATGCCAATGCCCGCTCAATGGCAATCACATCCACAACAGCCGCAACAATCGCAGATTAGGCCAA
GTATCGGCGTTACCGAAGAAAGAGGTGGCATAGTAGAGCAGCCTCAGCAAGCGCCAATAGTATCCGAGCAGAGTACTCCG
ATGTTCCCCGTTGCTGGACCGGAGACTACTAATCAGAACGCTCAGGTACCGCCTGGACATTTAAACGCACAACAAATACC
TGCAGTCAGTCAGACTACCGGTATGGTATTGTCACCGCATCAAGCTGCGGTTCCCGTGCCAAATTCGCAAACACCGCAGT
ATCATTCTGGAGGCGATATGATCACCGGCAACACAATGCCGAACATGTATAGTATGCCGACTAATCCTACACAAACCCCA
GTCGCAACTGCCGGTTTTGGCACGTCTTGTGCACCGCTCACGCATCATCAAGAACGAGCCGCATTGCAGCAGCAGTTACA
GGAATTGTACTGCATGCCACCAGCTCCGGAAAATCAAGAAAAGATTGTCGCCTTGCAAGAGAAATTGCAAGCGTTACAGC
AGCACGAAACGAATGATCAATGTAATGGTGGTCCACAATGCATATTACAAACACCGATGTTTACAGCTGCTGTAGTTGAT
AGTCCACAGGTTTCCAGTACTACTGGACGTGGTCGTAGTAAAGGTACGCCTCGAGCAAAGAAAAGTCGTAAAAAAGCCGA
TAAAGAGGCATCTGCACCTACCACTGCCACTCAGCAACCTGAGCAACCTTTATCGGACAATAAAGTCACTCCAGGTGATA
GCAGCAATGTAGTAGACAGTGCTGCAGATTCAGAAGACATTAAGCCATCTTCTGGGGATATGGAGGAGGAATGGAATAAA
GGCAGAAAGTCCCGATCGCCTCGAAAACCACGCAAGCCGAAGGAACCTAAAGAGCCCAAAGAACCGAAACCTAAGAAGGA
ACCAAAACCACCTAAGGAACCGAAATCACCGAAAGTGGCGAGGAAGAGAAATAAGGATAAAGACAAAGATTCCACAAAGC
GTAACAGAAAAAAAACTAATCAATCTGAGTCCGCTGATGATGAAGTTGTACGCGAAAACGAAGAAACTGCTGTTTCGGAT
TCTAGTGCTGTTAAGGATGCCGAGACAAAAGTCTGTGAATCATCCATACAGGGTGATCAGGAGCAAGTGGATTCTTCTAC
CAATGAACCTATGTTATCCGAAATAAAGGAAGAAGGTAAAGAGAAAACTGGGACAGAAGATGCTACAGAGGAGGATAAAA
AAGATGAAAACTTGGAAACGACTACTGCAACCGCTGAAAATACGACTAGTAAAAAGAAATCTGCAGCTAGGAAACGATCT
AATACTGGCAAGTCATCTGGAGGAAAAAGTTCCAGAAGTTCTAAAAAACGCAAGAGTCGCATTGCTCCTGATTCTGATGG
CGAGGAATTAGCGGCAACGCCTCCGCCATCACCGGAAGCTGGTGATGATGTAAATAAGCGGCGATCCGCGAGAAACACTC
ATCGCAAAAAGTATGTAGATGATGTAATGTTGCGATTCTCTGATGATGATGTTCCTATGCAAGAAGCTCAAGTGTCGAAA
AAAGTGGAAGGTGCAAATACTTCAAAACCTGCTGCCACCAAAAAGGAGGGTGGTGAAGGCGGCGAAGTCGGGCCTAACAA
ACCCAATTTTGTATACATTAACACTACAGATGAAGACTCTATGGTTGTGCAACATATTTTATGCTCTCGAATGGGAAAGA
GAGAAGTTAAGCCCGTGGTATCCAAAGTAGAACTGCCTGTAGAAAAGAATGAAAACGTGGATAAAGAAGAATCCGACAAC
AAAGACGTGACATCTGATGATTCTGTGAAAAAAGAAGGTACAGAAAATAACGAGAAAGAAGTGAAGACCGAGGCCAAAGA
CGAGGGAAAAAGTGAAATCGATAGCGTAAAAAAGGAAGATGCAAAGAAAGTGGAAGAACTTTCCTCGGATTCGAAACCAG
TTGAGACTACCACTGTTGTCGAGACAAAGCCACAGTTCGTCGAAGCCGAAGAATATTTCGTTAAATATCGGAATTTTTCG
TATTTGCATTGCGAATGGAGAACGGAAGAGGAAATGTACAAAGGCGATAAACGTATCCAAGCTAAATTAAAAAGATTCAA
GCAAAAGCAACAACAAAACACCAACATTTTTGAAAATACCGAAGATGATCCCTTCAATCCAGATTTTGTCGAAGTTGATC
GAGTTTTAGATGAAGCAACTCACAATGATCCAACTACTGGAGAAACAGTCCGACATTTTTTGGTCAAATGGCGATCTCTG
CAGTATGAGGACTCTACCTGGGAATTAGAAGAAGATGTTGATCCTGAAAAAATAGCTCAGTTTGTGAGATTTAATAAGGT
GCCACCAAAAGAACAATGGAAG
PEP:
>ACEP12493-PA
MDYDLFGEDVSGSMLEALPDLGGNDHFDPAPANNSVAVSRDGLNSGPNGGGSYINQSYNISQESPIQKLTSFGGSEFGGS
NQLQNPSQRSMFNQNLGTFDNSATPQRAMVPGAFQNQTRNIAPQQHRGPHPGTGGQYPSYNDNMYSMEQQHSIARANMSM
DPSQQGWPGNGTGYPQMQRHYNQMAPQPAAYRQHMPPQYSHQQDQAGVINQKMQQQQQQQQHFSQQGMIGNMGVLHQSMQ
PGTTGGVYQHMVGQQQHYQQGNTVAAMYQTTPGYPGFASAIHQQQQAQQPPQARMPHHHPAHPTHQPHPSHPQQYPQHTP
QHPNTQQQPTMDPQYPHHATSMFNQPQHSAPPQQQFGTAPTKHSTSPQYRAAFPQLSPQMSPRPQMSPRPPAVQQQMSPR
PIMSPAKPTTLSPHPHVQLPHQQGNQANAMSVSPSCPPTSMQINPSSQQQQTTLQALEQMVMPGVAVSNSSVPTSDQYNQ
FQTRPPMSQTPNVLPQQPTAQSPMPGQVTGPRMPMPAQWQSHPQQPQQSQIRPSIGVTEERGGIVEQPQQAPIVSEQSTP
MFPVAGPETTNQNAQVPPGHLNAQQIPAVSQTTGMVLSPHQAAVPVPNSQTPQYHSGGDMITGNTMPNMYSMPTNPTQTP
VATAGFGTSCAPLTHHQERAALQQQLQELYCMPPAPENQEKIVALQEKLQALQQHETNDQCNGGPQCILQTPMFTAAVVD
SPQVSSTTGRGRSKGTPRAKKSRKKADKEASAPTTATQQPEQPLSDNKVTPGDSSNVVDSAADSEDIKPSSGDMEEEWNK
GRKSRSPRKPRKPKEPKEPKEPKPKKEPKPPKEPKSPKVARKRNKDKDKDSTKRNRKKTNQSESADDEVVRENEETAVSD
SSAVKDAETKVCESSIQGDQEQVDSSTNEPMLSEIKEEGKEKTGTEDATEEDKKDENLETTTATAENTTSKKKSAARKRS
NTGKSSGGKSSRSSKKRKSRIAPDSDGEELAATPPPSPEAGDDVNKRRSARNTHRKKYVDDVMLRFSDDDVPMQEAQVSK
KVEGANTSKPAATKKEGGEGGEVGPNKPNFVYINTTDEDSMVVQHILCSRMGKREVKPVVSKVELPVEKNENVDKEESDN
KDVTSDDSVKKEGTENNEKEVKTEAKDEGKSEIDSVKKEDAKKVEELSSDSKPVETTTVVETKPQFVEAEEYFVKYRNFS
YLHCEWRTEEEMYKGDKRIQAKLKRFKQKQQQNTNIFENTEDDPFNPDFVEVDRVLDEATHNDPTTGETVRHFLVKWRSL
QYEDSTWELEEDVDPEKIAQFVRFNKVPPKEQWK
Swiss-ProtChromodomain-helicase-DNA-binding protein 9
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF00385  Chromo; Chromo (CHRromatin Organisation MOdifier) domain     
SMARTSM00298     
ProSiteProfilesPS50013  CHROMO_2; Chromo and chromo shadow domain profile.     
CoilsCoil

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