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Gene detail [Fasta]

Species Atta cephalotes
GeneACEP16958
Positionscaffold00040:1612074..1618641[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/acep_10/?name=ACEP16958
sequence mRNA: 
>ACEP16958-RA
ATGTCTCGCAGTTTGCCGGACAGAGTGGCTGGGCTTTATTATGCCCACGGCCTATTCTGCTCCTCTCATCCCGTCATCGT
CCTCTCTCTCGCGATATCGGTTCTTTTATTATGCTGCTGTCCACTTGTCAATCTGCCTATGCCAGGCAATGCTCCGAAAA
TACTAATCAATGATACTGTCCTACCAGTAATAAACGACACGGAGACCTCGGTACTGTATGTCCAACAAGTGGTACTAAGG
ATCGGAGTGATGCCATGGAGCGAAGATTTGACGCTGATGGATGCCTTCAGAGGACCTTTATACGAAGTGTTCAATCTTTT
GGAGATCATACAAAACTATCAGCATCCAGAAACATTAAAAACACTTGGCCAAGTATGCTTGCACATTGAAGCAGTGAAAA
AAAGAAATGGCAAGAAGGCTGAGGTTTTGCCGGAATACAACTGTCTTGTTCTATCACCTGCAAATCTCTGGCAACAAAGT
ATAGAGTTATTTTCTCAAGACACAAATCTTATTAACACTATATTTTCATATCAGAATCTTCAAAGAGGTAAGATAAGTCT
TGCAGAAGTGATGTTTGGAATGAGTTTAAAGGAAACAGGAGTGAAACGATATCCTGCTCGAGTTCGCCAAAGAATCCTCC
AATATGCCGTGACCATTTATTTAAAGAAATATGATCAGGAATTCATAAAAGGATTGCAGCATCGATTACGAACGTATTAT
CAGCTGCATCAAACCGTCGACAATAGCACGGACGTTGATACGCATAATGAAGTATTAAATATTTTTTATCCTGGCGAATT
CAATTACAGTGAATTCTTCCCGTTAATGATGACTTCCCTAGCCTTATTTTTCTACGAATACTTCCAAGTGCGGAAAATAG
AACTGGTAAAGTCTAAAATTGGCATTGCATTCAGTGCCAGCGTAACAGTGATGGGTTCGTTATCAATGACTGTGGGTGTG
TGCTTTTTCTTTGGTCTGACATTGAGCATGAGTGCCAAAGAAGTGTTTCCGTATTTGGTGATTATCTTCGGCCTCGAGAA
CATTCAAGTGTTGACTAAGAGTGTCGTTAGCACTCCAGCCCAACTGGACGTAAAGATACGTGTCGCTCAGGCTTTATCTA
AAGAAGGATGGTCTATTACGAAAAATCTGCTTACAGAAGTGACGATCCTAACTATCGGTTTATTTACTTTCGTACCTGCT
ATCCAGGAATTTTGTATATTCGCCATTGTTGGATTATTGAATGATTTTTTTCTACAAATGGTATTCTTCTCGACGATCCT
GGCGATCGATATCAGACGAACAGAGTTATCCAGTGAGAATTCCAAATTTCACTTGTCGCACATTCAAACATCACGCAGAC
AACAGTTTACCACTACCATTACCAATCGAAAACCTCATATATTCCGCTCTAAGTCTCATCCGAGATTGAACGGCCTGTCT
ACCGGCCCGACGAACGTTATTGCTCCGAATACACAAAATACTCACACACTGACCAAGATTCCCAAACGTTTGAGATTGGT
GTATTTATGGGCTCGAACACGAATTTTCCAGCGTGCATTTATGGTAGGAATGGTTGTGTGGATTAGCATGGCTATTAACA
ATTCTGGTATCATTGAGCACATAATACATCTTAGCGAGACGCTAAAGCCAGAAACTGACATGGATGGTTATACAGTAGAC
AAGCCTCCATCATTAAACGATTATGTTAAGCTAAATACGGTAACACCTATTTCTATATCGCCTGCAACTGTAGCCCCAAA
TAAGTTAAACGAACAGAATTTAACTAATAATACAACAGAGGAATTAAATAAGCTAAGACCTATGGATTTTCCGCCTTGGA
ATAGTTTGTCACTGTATCATTGGTCTTCGATTCTTTCAATGTATAATGTGTCGATTGCTGGTGGAAGAGTGACTATACTA
CCGACTATAAAATTATCGTACGCGGTGAGCCCGCAATTAGCAAAACAAATTAGCAATCCAAATGATGTTCAACACTTCCA
GTGGCAGAGTCTCGCTACCGCTGCGCTTGATCCTTTAGATTTTTCAGATATGGAAGTACCATCGAGATCAGAAGGACGTG
TATTTAATACGGACACGCCTTTTGTACCGTCGAGTCCAATGGAGATATTTCTAGCCGCTCTGCTGTGTCTTATTAGCGTA
ATCGTGGTTGCTTATACAATGGTTGTATTATACCGTTGTATTTGCACGAGAAATTACGCGGAGTGGCGAGCCAGTTGGCA
CCAGCAAGAAAAGACGCACGATTACGTTACTCAATTAGTGTTGGAAGCTGTGCCTCTGGTCTTGGAAGGCCATACTCAGG
AAGTAGAATGCATTGCGACGGACGGTAACACCGTTGCTAGCACATGTTTAGCGGGACATATCAGAATATGGGATTCGACG
TCTGGCGAGCAATTGGCGCATATCGATAGACGACAATTTTTCAGTGGTCCGCAGAAAACGCTGAGTCAAGCGTCGCCAGA
TGCCGACGAGCTGATGTCAGATTATGAAAGCGGTTCGCCACCTTCTCGAGGTGAAATGGAAGTGGCACAATCGATGGGAC
TTTATTCACCGGCCTCGGCAATGTGTCAGGGAAAGTTATCTCCCGCTTACAATATGCGAAGAGTTAATAGTAACAATAAC
AATGATCATAAAAGACGATCTATAGGAAATATGTTAGATTACGATTATCAACTCAATGAACTCAATAGCGACAATAAGCA
AAAATTATTACGTCGAAGCTTAGGCAGTGCCTACGATCTTCCCGATCTAAAACCGGCGATAAACATAAAATTCTCAACTA
TAAAATATACACCCTCGCAAAAAAATTATGATCAAGGCTACGATTTCGGGGAGCGATATAAAATCTTATTCGATGAACAC
AATAAGTCAATCGAGGAGATGCAAAAATCTAAAATCAGGGAACAATTAGGTGTTTTTCCCGCAAGATCGAACAATTTAGT
TGGCAGTACATCCTCCATAAATACCGACCGCACAATACAATCGTCGCCCATTATAGCGGCGATTTGGTGTATGGATTATC
AGGAAAATCTTGTAGTAGTAGGGTGCGCTAATGGCAGTCTAGAATTCTGGGAGGGTACGACCGGTAGATTCAAGTGTCTC
TTCGATGATGGATCAGGGCTTGGAATCTCTGCCGTTAGACTCGTTGGTAGCAGAGTAGTGGCAGCTAAATTGAATGGTGT
TGTCGACTTTCTGCAACTTGAAAGTTATAGTGAAGGTCAGCAGATTGATTGGGGCTTCACATCTTACAGAAGAACGCATG
TGCGAACGGGAAGTGCTGGTTCGCCCATGGATCTAAATAACTATATGCAAACGGAGGAAGATTTGCGCTGCATGAAAATT
GGCTCTCATAGAGCACATCAACAAGCGATCACTGTTTTAGATAGCGAAGGTGGACGTGTATTAACAGGCAGCCAGGATCA
CACCTTGAAAGTATACAGGTTAGAGGATCAGTTACCTCTGTATACACTTCATGGGCATTGCGGTCCGATATCGTGCCTCT
TTATCGATAGAATAAGTCCCATGACATCCGGTAGTGGGTCTCAAGATGGGTTACTATGTGTGTGGGATCTTTTGACAGGA
GCATGCATGTATAGTATTCAAGCCCACGATGGTGCTGTAGCCGCTATCACATGTTCAGTGTCCTATGTGATAAGTATCGG
AACAGATGAAAGACTGTGTGTCTGGGAACGCTTTCAAGGACACTTATTACACACTTTGCCAGCACATAAAGCAGCTTACA
GCTTACAATTAGTGATGTTAACGCATCATCTCCTCATAACTAGCAATCAGGGATCATTAGTAGTCTGGGATGTAAGAACG
GGTGAGCCAGTTCGAGAAGTGAGACTGGGTCATAAAGACAGCTGCATTTTCGTAAAGCAAATGCTGGCATTGAGGGACAG
CGTCGTTTGCGACTATGGTCGGCAATTGAGAATAGTCAGATTTCCATTGGTTTCTGATAAGCTGGATTAA
PEP: 
>ACEP16958-PA
MSRSLPDRVAGLYYAHGLFCSSHPVIVLSLAISVLLLCCCPLVNLPMPGNAPKILINDTVLPVINDTETSVLYVQQVVLR
IGVMPWSEDLTLMDAFRGPLYEVFNLLEIIQNYQHPETLKTLGQVCLHIEAVKKRNGKKAEVLPEYNCLVLSPANLWQQS
IELFSQDTNLINTIFSYQNLQRGKISLAEVMFGMSLKETGVKRYPARVRQRILQYAVTIYLKKYDQEFIKGLQHRLRTYY
QLHQTVDNSTDVDTHNEVLNIFYPGEFNYSEFFPLMMTSLALFFYEYFQVRKIELVKSKIGIAFSASVTVMGSLSMTVGV
CFFFGLTLSMSAKEVFPYLVIIFGLENIQVLTKSVVSTPAQLDVKIRVAQALSKEGWSITKNLLTEVTILTIGLFTFVPA
IQEFCIFAIVGLLNDFFLQMVFFSTILAIDIRRTELSSENSKFHLSHIQTSRRQQFTTTITNRKPHIFRSKSHPRLNGLS
TGPTNVIAPNTQNTHTLTKIPKRLRLVYLWARTRIFQRAFMVGMVVWISMAINNSGIIEHIIHLSETLKPETDMDGYTVD
KPPSLNDYVKLNTVTPISISPATVAPNKLNEQNLTNNTTEELNKLRPMDFPPWNSLSLYHWSSILSMYNVSIAGGRVTIL
PTIKLSYAVSPQLAKQISNPNDVQHFQWQSLATAALDPLDFSDMEVPSRSEGRVFNTDTPFVPSSPMEIFLAALLCLISV
IVVAYTMVVLYRCICTRNYAEWRASWHQQEKTHDYVTQLVLEAVPLVLEGHTQEVECIATDGNTVASTCLAGHIRIWDST
SGEQLAHIDRRQFFSGPQKTLSQASPDADELMSDYESGSPPSRGEMEVAQSMGLYSPASAMCQGKLSPAYNMRRVNSNNN
NDHKRRSIGNMLDYDYQLNELNSDNKQKLLRRSLGSAYDLPDLKPAINIKFSTIKYTPSQKNYDQGYDFGERYKILFDEH
NKSIEEMQKSKIREQLGVFPARSNNLVGSTSSINTDRTIQSSPIIAAIWCMDYQENLVVVGCANGSLEFWEGTTGRFKCL
FDDGSGLGISAVRLVGSRVVAAKLNGVVDFLQLESYSEGQQIDWGFTSYRRTHVRTGSAGSPMDLNNYMQTEEDLRCMKI
GSHRAHQQAITVLDSEGGRVLTGSQDHTLKVYRLEDQLPLYTLHGHCGPISCLFIDRISPMTSGSGSQDGLLCVWDLLTG
ACMYSIQAHDGAVAAITCSVSYVISIGTDERLCVWERFQGHLLHTLPAHKAAYSLQLVMLTHHLLITSNQGSLVVWDVRT
GEPVREVRLGHKDSCIFVKQMLALRDSVVCDYGRQLRIVRFPLVSDKLD
Swiss-ProtSterol regulatory element-binding protein cleavage-activating protein
SUPERFAMILYSSF82866  Multidrug efflux transporter AcrB transmembrane domain superfamily     
Gene3DG3DSA:1.20.1640.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50082  WD_REPEATS_2; Trp-Asp (WD) repeats profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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