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Gene detail [Fasta]

Species Atta cephalotes
GeneACEP19950
Positionscaffold00015:1274231..1277604[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/acep_10/?name=ACEP19950
sequence mRNA: 
>ACEP19950-RA
ATGCGGATACAAGTCACAAACATTAATACTTTAGACAGTATAGAATTAGAAGGTCATGAAGCACCTATCTTGGGTTTATC
TTTAGATCCAAAAGAAGAGTTTGTGGCATCTTCTAGTGCTGATGGATCTATTCGAGTATGGAATATTAAAGAAAAAAGAA
CCGTACATGTTTGGAATAATATTGTACCAAAATGTAACTCCTTTTTTATTGCAAAATCATATTGCACACCTTCTTTCAAA
TGTACAGATGGCAGTTATTTAGCATATCCAGCTAACAAAGATATAGTTATCGTGGAGAGATTATCCTGGAAGGAATTGTG
TAGACTGAAGTGTCCTACTTTAAAAACTGAAATCAGTATTTGTAAGTTCTCTGAGTGTGGCACGCGCATTGCAGCTAGTT
CACTGTATGGAGAGATAGTTGTATGGAACGTTGAAACCAAGGAAATAATTGGATATCTCGAACACGAGCAAGATACCAAA
ATCACTGCATTGGTGTGGCACATAGATCATTCAAATGAAATCGCATTCTGTGATGCATTAGGAAAATTAGGATGCATTGA
TGTGATAAGTACTAGTAAGCCTAGAAATGATGTAATGTTAGATTTTGAAAAAAATGAAGATACAATAGAAAATAATATTG
CTTTATCGGACCATGATGATGATGATGACGAAAACGTGATATCCCTGAATAAAATCAAGGCTTCTGTCAATTTAGAAGAT
GACGAAAAATCTAATTTTGATGTAGACTCTGAAAAACCTCCATGTGATACAAAAACTTTTATACCTAACGTAAAATTGCA
ATCATCTTTTCAACCCGGATCTACGCCCTCTCATTTATTATCGTATTTTATGGTACGGTACAATAATAAAGCTTGTATGT
GGAACGATGTGGGAATGATTAGATGTTTCTCATCAGAGGATGGAGAAGAGTGTAGTATTGAAGTGGAGTTTCATGATGTT
ACAGTTCATCGCAGCATGCATATAAATAATTATTTACGACATTCATTAGCTGCCCTATCTACCCAAGCACTTGCTCTAAG
CTGCGCAGCTTCTGAAGATGGCCCTAGTAAAATTGTCGTGATAGCTCTGCAAGTCTCAAAATCGACATATTTTATAATTA
TCAGAACAGTATCTAATATACTTGCTTGTTTTTGTATATTAGGTTGGGGTTCTGGAAATAAAGAATGGTCTTTGGATCTA
CCAGAAGGAGAGGAAAGCGAATGCTTAACGGTTGGTGATAATTTTATTGCAGTAGCAACATCTAAGAGAAATTTAAGAAT
ATTTATGATAGGAGGGACACAACGTGAGATTTTAGCTGTGCCTGGACCTGTAGTTGCAATGAATGGTCTAGGAAATCATC
TTTTAATAGCTTATCATGCTGGAATTGGTAAGAAAAATTTTGAATATAATGAGTTAATTGTAAAATACTTTTCTGTGGAA
AAAGGTCCAGCAGGTGATCAGAATATAAGTTTACTATGGATACAAATACAGGGAGCGCATTTACGCAGTCAAACTTTAAC
GCTTCCACTTTCACCAACTTCAGATCTCATGTGGTTGGGATTATCAGATGCTCGTTCGCCCACTATCATGGATTCTGACG
ATGTCATTAGGATATATGATAAGAGATCTTGTCAATGGAGAGTGCTCTGTGATGCAAATATACAGGGAAAAGGTAGAGCA
GATCACTATTTCATAATCGGTGTAAGCGAATACGAACGGAATATGCGATGTATCCTTTGCAAAGGTAGTTATTATCCACC
GACTACCCCGCGACCAATAATCACTGAGGTATCTCTATCTGCACCTCTCTGCGAACCAGAATCTGAGAAAACTGAGAAAG
AATATAAACTGTGGGAGATAGGAAATAATCCATTGGATGAAACTGAAGCGATGTTAACTTTAATAGCGCTTGCCTGCAAA
AGCAATTTAGAATATCGCGCAGTGGACATTTGCGAACAAATTGCGTCAACGAAAGTGATTGATTTGGCCATACGATATGC
CTTGCGTTCAAATAAAATGGTATTGGCAAATAAATTGGAGACGATCGCTGACGCAAAATCAGATTCCAAAGATACAAAAG
AAAAAGAAATGGAAAATCTCCAAGACGATTTTACAAGTAACGGTAATTTTAACGATAGTCAAGACATTAATAGTCAAGAA
AACAATGATGTGTCTTTACCATCGATTAAAAAACCAGAGATAGAAATTAAGCCATTAGCCATGAGTCAAACATTAAAAAG
AGTAAATCCATTTTTAAAAGCTGGAAGTCCATCTCTATCGCCAAGAGGTTTAGCTGGTTTAAATAATTTACCCGAGAAGC
CCCAGAAACCTGCATTAAAAATCACGCCTGTTAAATCAAAATCGAAAACTGAGTCTAAGAAAGACTCGTTTATTAATTGG
TATGCCAAAAATAAAAAGAATTTGCAGGAAGAATTTCCTGAAGTAAATGTTTCTGAATTAACCAAAATCGGTTTGACACG
ATACAAAGAAGAGATGGCGCAGTCGAACACAGACAATGCGACTGGATCTTCAGAACTCTTCAAGAAACGAAAATTATCAA
GTCCAGATAAAGATAATAGCCAAGATGATGCAAAACGAGCTGTTCGTAGCAAACTCAGTGAATTTGCATTCGAC
PEP: 
>ACEP19950-PA
MRIQVTNINTLDSIELEGHEAPILGLSLDPKEEFVASSSADGSIRVWNIKEKRTVHVWNNIVPKCNSFFIAKSYCTPSFK
CTDGSYLAYPANKDIVIVERLSWKELCRLKCPTLKTEISICKFSECGTRIAASSLYGEIVVWNVETKEIIGYLEHEQDTK
ITALVWHIDHSNEIAFCDALGKLGCIDVISTSKPRNDVMLDFEKNEDTIENNIALSDHDDDDDENVISLNKIKASVNLED
DEKSNFDVDSEKPPCDTKTFIPNVKLQSSFQPGSTPSHLLSYFMVRYNNKACMWNDVGMIRCFSSEDGEECSIEVEFHDV
TVHRSMHINNYLRHSLAALSTQALALSCAASEDGPSKIVVIALQVSKSTYFIIIRTVSNILACFCILGWGSGNKEWSLDL
PEGEESECLTVGDNFIAVATSKRNLRIFMIGGTQREILAVPGPVVAMNGLGNHLLIAYHAGIGKKNFEYNELIVKYFSVE
KGPAGDQNISLLWIQIQGAHLRSQTLTLPLSPTSDLMWLGLSDARSPTIMDSDDVIRIYDKRSCQWRVLCDANIQGKGRA
DHYFIIGVSEYERNMRCILCKGSYYPPTTPRPIITEVSLSAPLCEPESEKTEKEYKLWEIGNNPLDETEAMLTLIALACK
SNLEYRAVDICEQIASTKVIDLAIRYALRSNKMVLANKLETIADAKSDSKDTKEKEMENLQDDFTSNGNFNDSQDINSQE
NNDVSLPSIKKPEIEIKPLAMSQTLKRVNPFLKAGSPSLSPRGLAGLNNLPEKPQKPALKITPVKSKSKTESKKDSFINW
YAKNKKNLQEEFPEVNVSELTKIGLTRYKEEMAQSNTDNATGSSELFKKRKLSSPDKDNSQDDAKRAVRSKLSEFAFD
Swiss-ProtWD repeat and HMG-box DNA-binding protein 1
KEGG     K11274     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50082  WD_REPEATS_2; Trp-Asp (WD) repeats profile.     
CoilsCoil
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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