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Gene detail [Fasta]

Species Atta cephalotes
GeneACEP24384
Positionscaffold00003:5171090..5185771[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/acep_10/?name=ACEP24384
sequence mRNA: 
>ACEP24384-RA
ATGCACATCGAACATGCAGCACTGAAGCCTAAAATTAACAATCCATGTCTTTCCAATCCGTGTTCCGAATTATGCATGCT
AAATCAGGAGAATGGATACACATGCGCTTGTACTTTGGATAAGAAATTAAACGTCGACAATCATACCTGTCAAGAGATGA
GAAAGAAGCAACATTTGCTGATAACTAATGGATACAAAATTGTAGACTATTATGACGGAATGATAGGAAAGCCGAAAGTG
GAATATGCAATATCATTTATACGCCTTGGATATTTAATAGACATGGCAGCTGATCCGATTACTGGTCAGATATTTATATT
ACACACTGAATGGTCGAGATCAGTATCAGCTATCAAGCGTTTTGATCCTCAAGATATTTGTGCTTGTCCTCCTGGAATGG
GACTCTCATATGACAATCGTACTTGCATTATGCATGAATGTCTTGCGAACGAATTTAAGTGCAGCGAACACAATGTCTGC
ATATCAAAGAAAAATGTGTGCGATGGTATTGCACATTGTCCGAATGGTGAAGACGAGACCATAGACTGCTATGAAAAAAA
GATATGTAAGAAAGATCACTTTACATGTACAAATGGCGAGTGTATTGATATAAAAGATCGTTGTAATGGGTATTACGATT
GCATTGATCATTCGGATGAAAAGAATTGCAAAAGACCGAAATGCAGAGAAGATGAATTTCAATGTCGTGACGGATTAATC
TTTTGCATATCGGAGAGGTTTATATGTAACAATATATCTAATTGTGAAGACGGATCGGATGAAACACACGAGGCATGTAA
ATCAATACAATGTTTAGAGGAACAATTTCGGTGTAATAATGGTTATTGTATATCTGGTTCGCTGATGTGCGATGGTTTCT
ATGATTGCCTCGATAAAAGCGATGAAGTATTATGCCCACATTCTTTAGATAATTGCAACAAAAACGAATATCAATGTTTC
GACACTAATTTGTGTCTTTCTAAACAAGTAAGATGTAATGGCGTATTTGATTGTCCGAAATATGATGACGAGTATGGCTG
TGAAGTGTGCTCGAACGATGAATTTAGTTGTGATGGAATGAAGTGCATTCCGAAGAGTTGGGTATGCGACAAAAAGATTG
ATTGCGACGACATTTCAGATGAGAAAGATTGTGTCGATGGTAAAAAAACCACCATGGAATATACCAAATGCCATGAATTC
AAATGTTCTATTGGTACTTGTCTGCCGTACTTGAAAGTATGCGACGGTATTCAAGATTGCCCAGACGGCAGCGATGAAAA
TGAAAAGTGCCGTGAATTTGGCACTATTAAGAAACTTAAAATTGGAACGAAGGAAATATTCACAGTACATACTACAGAGC
ATCCGCAGGCACTCGCGATTGATTGGATCACCGATAATGTCTATGTCAATGATAATGGCTTCGTAAGCGGGATGACACTC
GATTACATAAAATCTAAATTATATTGGTTGGATAGTTTTAATAATGCTATCAAATTATCTAATTTGGATGGAAGCCAACG
CAGCACGTTCTTAAGAATGAATATGCATCATCCGTTAAGCATTAGTATTTATGAACAGTCACTTTATTGGTTAACGGGTA
TAAATGGTCAACTGCGACGTTGTAAATTGTATGGTAACAAATTGTGCGACATATTAGATATAGACACAAATAATATTCAC
AGACAGTTTGCCATTCTGCATATTTCCAGGCAACCTTTTAATTGGTATGAGTTATTAAATAAAGATAAAAATCTTTGTGA
CGAAGAATTTTGCGATTACATCATTCACCGCATTCGTTTTCAAAATCCGTCGTATGGTCAAAGAGATGAGGTTGAGTTAA
CATTCAATTCGACAATTGAAGACAGATCTCCTGAACAGCACGAATACGTCAATCCTCTTGATGATGAATTTTTCGCCGGA
CGACAATCGACGCCGGGCGAAGACGAAAATATGTATACTTAG
PEP: 
>ACEP24384-PA
MHIEHAALKPKINNPCLSNPCSELCMLNQENGYTCACTLDKKLNVDNHTCQEMRKKQHLLITNGYKIVDYYDGMIGKPKV
EYAISFIRLGYLIDMAADPITGQIFILHTEWSRSVSAIKRFDPQDICACPPGMGLSYDNRTCIMHECLANEFKCSEHNVC
ISKKNVCDGIAHCPNGEDETIDCYEKKICKKDHFTCTNGECIDIKDRCNGYYDCIDHSDEKNCKRPKCREDEFQCRDGLI
FCISERFICNNISNCEDGSDETHEACKSIQCLEEQFRCNNGYCISGSLMCDGFYDCLDKSDEVLCPHSLDNCNKNEYQCF
DTNLCLSKQVRCNGVFDCPKYDDEYGCEVCSNDEFSCDGMKCIPKSWVCDKKIDCDDISDEKDCVDGKKTTMEYTKCHEF
KCSIGTCLPYLKVCDGIQDCPDGSDENEKCREFGTIKKLKIGTKEIFTVHTTEHPQALAIDWITDNVYVNDNGFVSGMTL
DYIKSKLYWLDSFNNAIKLSNLDGSQRSTFLRMNMHHPLSISIYEQSLYWLTGINGQLRRCKLYGNKLCDILDIDTNNIH
RQFAILHISRQPFNWYELLNKDKNLCDEEFCDYIIHRIRFQNPSYGQRDEVELTFNSTIEDRSPEQHEYVNPLDDEFFAG
RQSTPGEDENMYT
Swiss-ProtVitellogenin receptor
SUPERFAMILYSSF57424  LDL receptor-like module superfamily     
Gene3DG3DSA:2.120.10.30     
PfamPF00057  Ldl_recept_a; Low-density lipoprotein receptor domain class A     
SMARTSM00192     
ProSiteProfilesPS50068  LDLRA_2; LDL-receptor class A (LDLRA) domain profile.     
PRINTSPR00261     
ProSitePatternsPS01209  LDLRA_1; LDL-receptor class A (LDLRA) domain signature.     

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