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Gene detail [Fasta]

Species Harpegnathos saltator
GeneHSAL12887
Positionscaffold3:877322..916923[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/hsal_33/?name=HSAL12887
sequence mRNA:
>HSAL12887-RA
ATGGCGGAGGTGGCGACGAAGAAGTCCATCAATGTAGTAAGTAGCAAGAAGAGCGAGGTGTGCGGTGTTCAGTCTAACAA
CGGCTTGATTGATTTGGATAACCTAACCGCGAGTAACAAGCAACTAATCTCGCTGTGCGGCGACAACAACGATGACGACG
ACGACCTCGTGCTGACCAACAACAGCCGTAACGAGCTCGCCGGCGACGACAAGAGCCTGCAAGAGCTGATCGAGAGCGAG
CTCGCGCTGAGGATCTGCTCCAACAAGAACGACGACGACGACGACGACGACGACGACGAGGTGGTCGCCGACGAGCCCGA
GGAGATCGCCACGCAGCCGGAGACGATCCGGCGGATCGTGCTGGATCGCCGACAAGACAGCCTCGACGTGAACGCGGAGT
TCATAGCGGCCGAGAGCGAGCACTACTCCCTGATCGAGGAGCCTTACGGCCAGCAGAACGGCCACGCGTCTCCGGACGCG
AACGCGGAGGACGTGAAGCCGGAACCGCCGCTCCACGTCCGCGACGAACAGGAGGACGAACAGGTGTTGGTCGAGCAGCC
GGAGCACGGCGACGCGACAGTCATTCAGAAGGCAAGCGACGCCGAGCCGCAGTCGAGCCGCGACGAGGTCGCGAACGACA
GCGAAGACAACTGTGAGCACGTGAGCGTCGCCAAGGACGCCGATCCGCAGCCCACGGAGGTGCCGGACTCCGGCGAGGTC
GCGCGCGACCTCGTCGCCGAGACCGTTTCTCAGCCAGAGCCTTCCCCGGCTCCCGTGGCTTGTCTCGACAAGCAGCGACA
ACAGGAGGAGGAGTCGGCGCAGAGGATGACGGACGACGCGGACCTCCTCCGCATGGACCGCACCGAGCAAGAGCGCAGGA
ACGCGGACGTCGTCCCGGACACGTTGCTCGAGCTGCCAGTGTCCGAGGACGGTGAACAGGCGTGTCAGTCGTTCCACCTG
GACAACCTGGACCGAGAGATCAACGAACCCATCGGCGAAGGAGGTCCCGCGATCTCGACGTCGCTCGGCGTCGAAGACGA
GGAGAAGGAGGCGGCGGCTGCGGCGGCGGCCTCGGCGGTCTCGCGAGACCGAGAAACGTCGCTCACCGAAGCAACGGATC
AGGAGGCGGACTCGAAGCCGAGCGAGATGAAGCTCGAGGAAGACGGCTCCACGAGTCAGTCGGAGATGCTCGCCGAGACG
GCCAGCACGCAGGAGTTCCTCGACACCGAGCGGCGCGTGCTGAGCGAGGAGGCCGATCAGGAAGCGCCGCGGATTGTCGT
GTCGTCGGAGGCCACCGAGTCGCAGAGCGTGTCCGAGCGGAGCTTCGATAACGAGTCGGCGGAGTATGCCAAGGACGTCG
CGGAGGACGCGCAGAACCCGGTGGACGAGTCCTCCAGCGAGTTCTCCGCGTCCGACTCGACTTTCATCGAGAAGACCGAG
ATCGTGGTGTCGGACACGAGCGTGACCGTGTTCTCCGAGACGAAGCAGCTCGAGCCGCTCGAGACCCTGGACTCGTGGAC
CACGGTCGAAGAGGCCACGAAACCGGCCTTCGACGGGGAACGGAAAGACGCGCCGGTCGCGGCCGATCACGCCGCCGCCG
CCGCCGCCGAGCCGACGGCGACGGACGATAGTCACGAGGGAAAGCCGGAAGACTCGCTCGCGCCCTCGTCACCCCGCGCT
CCATTGGCCACGCCGGACGACGAGACCAGCGACATTTCTAACGCCTGCGATAGCGAGAGCCGCGAGGAAACGGTGACCAC
CAGCTCCACCGTGGTGACCTCCTCGAAGGGCGGGACTAAAACGAAGAAGAAGAAGATCGAGGGCGTCGCTAGTAACGATG
CCACCTCGCCGAACCTTACGCCGCGCACAAAGAAAACCAAGAAGAGCAAGAAGAGCGATCTCGAGAAGGAGAACATCTCC
GTGAACTGTAGTTTACGTGACGCAAGCATGCACACGGGTACTCGGCGCACGCACTCGGAGATGATCGATTTCTCCGACGA
GGACGATCTATCGAACGTCAACGTCAAGTCCCTGACACAGAACTATGTCACGGAGACGAGTCGTAGCGATCAGGAGAAGC
TGTGCAGGCAACGCATCGCGACCGGCGTGTCCATCAAGCAATTATGTCGCAGCTTTGGCGACATCTCGAACATGAGCGAC
AGCGATCAGACAGCTTTCGGGAAAGCGAATCACGCGATGGAAACCGAGGAGAAAGCAAGGTCGATGGGTGATCTGAGAGT
ATGCGAGCAGGGTTACTCGAGGTTCACCAAAGACGCGCTCGTCTTCGCCGGGGTGTCGGTCAAGGCCCTCAAATCGAGCT
TCAACAAATTCGACGCTCTCACCAAGAAGACTGTCCTGCACGTGCGCTCGGTCGACGCCGGGAAGGTGCAACAACAGCTG
AACGCCGTGGGTCAGAACGGCGAGGCGAACACGAATTGTCGCAGCTGCGGCAAGGTCGTGTTCCAAATGGAGCAGACAAA
GGCCGAGGGTCTGGTCTGGCACAAGAATTGCTTCCGGTGCGTGCAGTGCAGCAAGCAGCTTAACGTGGACAATTACGAGA
GCCACGAGAGCACGCTCTACTGTAAGCCACACTTCAAGGAGCTCTTCCAACCGAAACCGGTCGAAGAGTCCGACCAGCCC
GTGCGACCTCGAAAGCCGGAGCTGATCATACGGGAGAACGAGCCGAAAGAGCTGCCGCCCGACGTGGTCAGAGCTTCCGA
CAAGCCAGATCTGGGACTCGAGGAGCTCTCGAGCCTGAACGTCAAGTCGCGCTTCCAGGTCTTCGAGAAAGCCAGCGCGG
AGAACGCCAATGAGATCGAGAGGTCGCCGTCGCAGATCGCCGTCAAGAGATCGCCCAGCATCCTCAGCAAACTGGCCAAG
TTTCAGGCCAAAGGTATGGACATTGGCGTGGCGGACGAGTCCCTCAATGGAATACCCTACGAGGAGTCCAGCGAGAGCGA
GGACGAGGTAGAGACGGAGGAGACCGAAGAGGTGGAGACCGAGATCGTGAAGGCGAAACGCACGACGCGCGAGCGTCCGA
TCAGTTTCTCCAAGATGGACGACATCAAGAACCGTTGGGAGTCCACTAGCCAGCAGGGCAGGCGCGAGGTGCAGCGCGAG
GCTAGGAAGGAAGAAATCGCGGGAATTCGCTCGCGGCTGTTCATGGGTAAGCAGGGTAAGATGAAGGAGATGTATCAGCA
GGCGGTAGCCGGAAGTGACCGCGTCACCAAGATAAATGCGGCGGAGGAGATTCAGCACTCGACCCACGCTCGCTCCATCA
AGGAGAGATTCGAGCGGGGCGAGCCGATCGCCGCCTCGGACGACGAAACCGACAACAGCAAGCCGAAGCCGGAGAAAGCC
GACGAGGAGGTGATCGCAGCAGGTATCAGCAGGAAATCGCGATCGCTCTTTTTGGAGTTGGACGCCTCTGCAGCGAAGAC
GGGACGTCCAGTGACGCCGGTGCACCCGAAGACGCCGACCGAGACCTCGCGGCGCGCACGAGACGCATTCATGGCTCGTC
AAGTCTCAGACGACGTGGTGCGCAGCTCGGACACGACCGAGGAGGTCCACGTAGAAACGTCCGACATTTCGAACAAGTTC
AAATTTTTCGAGTCCTACAAGGAGCCGGAGAAACAGCGGAAGCAGTTTCGCATTACGCCGCCGCGCGACGGCCAAGTCAA
GATGGACTCACCGGATCGCGAGATTTACCGCGATCCCGACGTGGTCAGAGCCGACGACAGGGTGGACGAGGTGGTGCATA
CGGACACCGCGAGGAAGATGCTGTCCATCTTCCGGCAGATGGAGGAGAACGCGTGCAAGGAGGACTTGCCGGAAGGCCCG
AAGCCCTTGAAACGCTTCACACCGCCTCCCGAGGACAAGTTCGCCAAGGCGACCGCCTCGGACTCGGAAGAGGACGAGGA
TGAGGAAGGCGAGGAGTCCGAAGGCGACGACAGCACCGAGGAGAGAGACCCCAACTACGTCCGCGCTTCCGACAAGGTGG
AGGACGAGTTCCTGAAGCAAGCGCAGAACGCGGCGCGCGCCAAGACCCTGCGCGCCAAATTCGAGCACTGGGAGGAGACC
GACGGCAAAGTCAGCAATCACCATATCGCCGAGATGGAGATGGCCCAAGGCACAGGCGAGCAGTCCAGCATAGAGTCCGC
GAGCAGTCTGCGAGCCCGCTTCGAGTCTCTCGGCTCGCAGACCAACGAATCTCCGCGCACGCCGAAGGTCAAAGTCAATC
GATTTGTGGAGATCCAGACGACCTGCGTGGACGTGTGCGAGAGCTGCCAGAAGAAGGTCTACCCGTTGGAGAAGGTCGAG
ACAAATAACAAAATTTTTCACAAGCAGTGCTTCCGATGTCTCCAGTGCAATTGCATCTTAAGAATGGACTCCTTCACGCT
CAACAACGGCAAGCTCTACTGCATCCCGCACTTCAAGCAACTCTTCATCACGCGGGGCAATTACGACGAGGGCTTCGGCG
TGGACCCACACAAGAACAAATGGGCGGCCACGAACTCCAACAATTCCACGAGCCCGTCGCCGATCGCGGTCTCGAACGGC
GATCTCTGA
PEP:
>HSAL12887-PA
MAEVATKKSINVVSSKKSEVCGVQSNNGLIDLDNLTASNKQLISLCGDNNDDDDDLVLTNNSRNELAGDDKSLQELIESE
LALRICSNKNDDDDDDDDDEVVADEPEEIATQPETIRRIVLDRRQDSLDVNAEFIAAESEHYSLIEEPYGQQNGHASPDA
NAEDVKPEPPLHVRDEQEDEQVLVEQPEHGDATVIQKASDAEPQSSRDEVANDSEDNCEHVSVAKDADPQPTEVPDSGEV
ARDLVAETVSQPEPSPAPVACLDKQRQQEEESAQRMTDDADLLRMDRTEQERRNADVVPDTLLELPVSEDGEQACQSFHL
DNLDREINEPIGEGGPAISTSLGVEDEEKEAAAAAAASAVSRDRETSLTEATDQEADSKPSEMKLEEDGSTSQSEMLAET
ASTQEFLDTERRVLSEEADQEAPRIVVSSEATESQSVSERSFDNESAEYAKDVAEDAQNPVDESSSEFSASDSTFIEKTE
IVVSDTSVTVFSETKQLEPLETLDSWTTVEEATKPAFDGERKDAPVAADHAAAAAAEPTATDDSHEGKPEDSLAPSSPRA
PLATPDDETSDISNACDSESREETVTTSSTVVTSSKGGTKTKKKKIEGVASNDATSPNLTPRTKKTKKSKKSDLEKENIS
VNCSLRDASMHTGTRRTHSEMIDFSDEDDLSNVNVKSLTQNYVTETSRSDQEKLCRQRIATGVSIKQLCRSFGDISNMSD
SDQTAFGKANHAMETEEKARSMGDLRVCEQGYSRFTKDALVFAGVSVKALKSSFNKFDALTKKTVLHVRSVDAGKVQQQL
NAVGQNGEANTNCRSCGKVVFQMEQTKAEGLVWHKNCFRCVQCSKQLNVDNYESHESTLYCKPHFKELFQPKPVEESDQP
VRPRKPELIIRENEPKELPPDVVRASDKPDLGLEELSSLNVKSRFQVFEKASAENANEIERSPSQIAVKRSPSILSKLAK
FQAKGMDIGVADESLNGIPYEESSESEDEVETEETEEVETEIVKAKRTTRERPISFSKMDDIKNRWESTSQQGRREVQRE
ARKEEIAGIRSRLFMGKQGKMKEMYQQAVAGSDRVTKINAAEEIQHSTHARSIKERFERGEPIAASDDETDNSKPKPEKA
DEEVIAAGISRKSRSLFLELDASAAKTGRPVTPVHPKTPTETSRRARDAFMARQVSDDVVRSSDTTEEVHVETSDISNKF
KFFESYKEPEKQRKQFRITPPRDGQVKMDSPDREIYRDPDVVRADDRVDEVVHTDTARKMLSIFRQMEENACKEDLPEGP
KPLKRFTPPPEDKFAKATASDSEEDEDEEGEESEGDDSTEERDPNYVRASDKVEDEFLKQAQNAARAKTLRAKFEHWEET
DGKVSNHHIAEMEMAQGTGEQSSIESASSLRARFESLGSQTNESPRTPKVKVNRFVEIQTTCVDVCESCQKKVYPLEKVE
TNNKIFHKQCFRCLQCNCILRMDSFTLNNGKLYCIPHFKQLFITRGNYDEGFGVDPHKNKWAATNSNNSTSPSPIAVSNG
DL
Swiss-ProtLIM domain and actin-binding protein 1
SUPERFAMILYSSF57716  Glucocorticoid receptor-like (DNA-binding domain) superfamily     
Gene3DG3DSA:2.10.110.10     
PfamPF00412  LIM; LIM domain     
SMARTSM00132     
ProSiteProfilesPS50023  LIM_DOMAIN_2; LIM domain profile.     
CoilsCoil
ProSitePatternsPS00478  LIM_DOMAIN_1; LIM zinc-binding domain signature.     

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