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Gene detail [Fasta]

Species Rhodnius prolixus
GeneRPRC005174
PositionGL563109:573666..595090[GBrowse]
sequence mRNA:
>RPRC005174-RA
ATGTCGAGCAATCCTCAGTGGAAATCATTCCAGCCGCCAACACTTACTGACACTTCAATCATTGACTACAAACCTATGCC
CGTCATGAAAGATATGGTGGCCAATAATCTGTACGCCCAAACGCACAACAATTACGCAAATTATAATGTTTATGGAGGTG
CTGCCGGAGGAGGTGGTGGTGGTGGTGGTCCTGCCAGTAATCCATCTTCTGGCCAACAATCAAATAATTCATCAACTGCG
AGATTCCCAATTGGTACATTCACCACATCCGACGGAGCAGATCTTTACAATGGAGACACAAGTTCGAATAACTCATACAA
TATGGGCAACTCTTCTAACAATACAGGTACACGAGAGACTGGGATTATTGAAAAATTATTGCATTCATACGGATTTATAC
AATGTTGCGAACGCCAAGCAAGACTTTTCTTCCACTTCAGCCAGTTTAGTGGCAATATTGAACACTTGAAGATTGGTGAT
CCTGTAGAGTTTGAAATGACATATGATAGAAGAACTGGAAAACCAATAGCCAGTATTGTTTCAAAAATAGCTCCAGAAGT
GGTTTTAAGTGAAGAACGTGTAACCGGGACTGTAACCACAGAATTACGAGCTGATGGATCCACAGCCGGCGGAGATTCAC
AAGGTAGGATCTCGTATGAGAATAGGGGAGAATGTTTCTTCTTACCATATACCAAGGATGATGTTGAAGGAAATGTTACC
TTAAGGACTGGTGACAAAGTGTCGTTTCAGATCGCCACGAACCCTAGGGGTAACCTTGGTGCAACACATGTACGTTTAGA
AAATCCAGCTCATCCTGTCAAATATCAAGGAGTAATCTGTTCAATGAAAGAGTCGTTCGGTTTTATTGAACGAGCGGATG
TAGTAAAAGAGATTTTCTTTCATTTTTCGGAAGCTAAGACAAAGGAAGAGTTACAATTAGGCGATGATGTAGAATTTATT
ATACAGACTAGAAATGGAAAAGAAGTTGCCTGTAACATAACCACACTTCCGCCAGGAACTGTTGTTTTTGAAGACATTTG
TGATGAAACAGTAAAAGGACAAGTATTAAAACCATTAGAACGTGGCCCACGATCTCATCAAAATACGGATCCATTACCGG
GTAGAATTAGATACCGTGCACCCGATCATTCAGAAGTTGAAGTGCCATTTGGAGATAAAGATCAATTACGAGACTTTACA
TTAAGACATGGAGATTGGGTTTCTTTCCGTATTGCTACCGACCGACGAGACCAACTTCAAAGAGCTACCAACATTTCATT
ACTATTGGAATCGTTTGAGGTGTCCGGCGAAAGAAGAGAAAGAGGTGCTGTTGTCGCTCGTAAAGATAATTTCGGCTTTA
TTCGTTGTGCAGATCGTGATGCACGTATCTATTTCAACTATTCTGAAGTACTGGACATGGATGTAGACATACAAGTTGAC
ATGGAAGTTGAATTCACCGTTGCACAGGATGCTATGTCTAATTTTGCTAATCAGAAACAAAGCGCTATTAGAATAAAGAC
ATTACCTAGAGGATCGGTTGTATTTGAGACTGTAGTGGAACGAGGTGCGAATATCACCAATGATAAATGTATGCAAGGTC
CTCACGAAAATGGACTTATATTGTACACATCAAGGGATGGTACGAAAAGGTCTATACCTTTTAGCCCGACAGCTTGTATG
GGTCAAGCATTACCTGCTCTTGGTGATAAAGTTGAATTTAATGTGGCACAAGTAAAGAGAACGAAAGAATTAAAAGCTGT
AGATGTTAATCTTGAACCACACAATGAACGGGCCATTAAACAATGGAATCTCCTTACCAGACATCACAATTCGACTGCAC
ACTATCAAGGCTTCATTGCTGCGTTAAAGGACGGTTTTGGCTTCATAGAGACAAACACCCATGATTCAGAAGTTTTCTTT
CACTTTAGTAATTTTGATGGCGATACATCGTGCCTTGAGCTTGGCTCAGAAGTGGAATACACTGTTGGCAGCAGGACTAG
TAGCGGTGGATCTTGCGCTTCTGCAGAGAACGTTACTTTACTGCCAAAGGGTACTATAGCTCCACACGTTACAATTGGTG
AAGAAGTATTCACTGGTAAGATAGTTCGTCCATTGAGATGTGTAAATCCTGAACAGGCGACTTACTGTGGACTTATTACA
GCTAATACTCCTTCAGATAACAGTGAAGATCATGTTGAATACGAGTTTGGTATCGTTGGGCTGCAGAATAAAAGGGAACT
ATTACAGGTCGGTGATGCTGTTAATTTCCAAGTGGATAGCGAAGGAAGAGCAGTCAATATTTCAGCAATCAGGAAGAAAA
AAAAGTCAACAGTGGATTCAATAAAAGGGCAGTTTGGTTTTCTTTCTTATGAACTGGAAGAAGGAAAGAAATTGTTTTTC
CACATGTCGGAGGTAAAAGATGGACAGAACAGTTTACAAGCTGGAGATAGTGTTGAATTTGTTGTGGTTACAAATCAAAG
AAACGGCAAATCGTTCGCCTGTAATGTGTCAAAAATTGGTGATGGTTCAAATGGAAGTGGTACTGCAACGCAAGCTCCCC
GGCCAGAACGTTTGATGTTAAGGCGATCATTACCTAGTGGCGATGAAAACGGTCCAAGATTG
PEP:
>RPRC005174-PA
MSSNPQWKSFQPPTLTDTSIIDYKPMPVMKDMVANNLYAQTHNNYANYNVYGGAAGGGGGGGGPASNPSSGQQSNNSSTA
RFPIGTFTTSDGADLYNGDTSSNNSYNMGNSSNNTGTRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNIEHLKIGD
PVEFEMTYDRRTGKPIASIVSKIAPEVVLSEERVTGTVTTELRADGSTAGGDSQGRISYENRGECFFLPYTKDDVEGNVT
LRTGDKVSFQIATNPRGNLGATHVRLENPAHPVKYQGVICSMKESFGFIERADVVKEIFFHFSEAKTKEELQLGDDVEFI
IQTRNGKEVACNITTLPPGTVVFEDICDETVKGQVLKPLERGPRSHQNTDPLPGRIRYRAPDHSEVEVPFGDKDQLRDFT
LRHGDWVSFRIATDRRDQLQRATNISLLLESFEVSGERRERGAVVARKDNFGFIRCADRDARIYFNYSEVLDMDVDIQVD
MEVEFTVAQDAMSNFANQKQSAIRIKTLPRGSVVFETVVERGANITNDKCMQGPHENGLILYTSRDGTKRSIPFSPTACM
GQALPALGDKVEFNVAQVKRTKELKAVDVNLEPHNERAIKQWNLLTRHHNSTAHYQGFIAALKDGFGFIETNTHDSEVFF
HFSNFDGDTSCLELGSEVEYTVGSRTSSGGSCASAENVTLLPKGTIAPHVTIGEEVFTGKIVRPLRCVNPEQATYCGLIT
ANTPSDNSEDHVEYEFGIVGLQNKRELLQVGDAVNFQVDSEGRAVNISAIRKKKKSTVDSIKGQFGFLSYELEEGKKLFF
HMSEVKDGQNSLQAGDSVEFVVVTNQRNGKSFACNVSKI
Swiss-ProtCold shock domain-containing protein E1
SUPERFAMILYSSF50249  Nucleic acid-binding proteins superfamily     
Gene3DG3DSA:2.40.50.140     
PfamPF00313  CSD; 'Cold-shock' DNA-binding domain     
SMARTSM00357     
ProSitePatternsPS00352  COLD_SHOCK; 'Cold-shock' domain signature.     

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