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Gene detail [Fasta]

Species Acromyrmex echinatior
GeneAECH20978
Positionscaffold59:729628..734760[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/aech_20/?name=AECH20978
sequence mRNA: 
>AECH20978-RA
ATGGCAGACTCGGGCGGCTGGGCATCAGCCCAGGAGAATGACTTTCCCAATTTTCAATCGAATGACAGCTTCAATTTGAA
CGAAGTCACTGGCATCGATGATCTTCTGACAAATTGTGAGAGTGAATTGCTGAAGAATGAGCTTTTCAGTGATGAGGCTT
TACTTTCCGAATTGGATGAGCCAATGCCAGTTGATGGAGACACATTTAACTTCTTAAATATCAATAATGATGAATTTAAA
GACTTCAAAGATCCAGCTATCCTTGAGCCATCAAACTCAAATGTTATGGTGCAATCAGTGCCACAGAATAGACCACAGAG
AATAGTAGCTTCGACAAAGCCTACAGTATTCAGCTCACAGTACACTATACCACAAAATGTGAATTTTAATGTACAGTCGC
CGAACGTTGTAACTCTAGCTCCTGTTACTCAACAGCGACAGCTACTTCTACCGGCCAAATTAATTAAGTCAGAATCTCTC
GTGTATTCAAAGGGTGGACAAACCATCACATCGACTCCTGTTCCACATCAAATACATACTCTTGTGAATACTACAAATGG
AACAGTGTTAACTACCGGGATACCTGTAGTATTGGACACTGACAAGGTACAAATTAATCGTCTGAACACAGGCACACATG
TGAGCGTACCAAGAGTGAGAGAAGTGAAACGCAGTGCCCACAATGCTATTGAGCGTCGTTATAGGACGTCGATCAATGAT
AAGATAATTGAATTGAAAAACATTGTAGTCGGAATTGATGCCAAGCTAAACAAGTCGGCAATTTTACGAAAAACCATCGA
CTACATTAGGCAACATCTGCAGAATTACAGTGCAAAATTAAAGGCTGAAAATATGGCGTTGAAGATGTCTGCGCAACGGC
ACAATCTTCGTGATTTGTACCAACAAATCCAGTGTGGAGAGCTGACACCTCCACGCTCCGATTCGAGCGAACCATCTTTG
TCACCCGCACCTGCGCCGCCGTCACCACCATCCCCGTCGTCGGTAAAAGACGATTCAGATGCGTTGCACAATTTACACTC
TGTACCAACTTCATCCATTGGAGGCATGAAAGATCACACTCGACTGACATTATGCGGATTCATGCTATTATTTTTAGCAT
TCAATCCTCTTGGTATCCTTATGAACAATATTGGAAGATTCAATTATGATTATGTGAATACGAAACTGGATGGACGAACG
ATACTCAATTATCCAGATCAGTTAGAATCGGACAAGCAACCGTGGAGCAATATTGTCCTCTGGTTTACTAATCTAATACT
CTTGGCAATTTGTCTCTATAAACTGTTATTTTACGGTGATCCCATTTTGCCTACCGACAGCAAAGTCTTTCTCGAAATAC
GTCGTTGGAGACGTCAAGCCGAATTCAACATATCCAAACACGAATGCAATCAGGCATATCGAGATTTACATCAGTGCTTG
CAGTATTTCGGCCGATCCTTCCCGTTATCACGTACGGAGGTTTTTCTCGCAACCACGTGGCAAATAGTGCGGCAGACTCT
TCACAAATTATGGCTGGGTAGATGGGTCATGCACATCAGCAAGTGGTTGTCAGAGAAATCAGAACGGCAACAGGCGGAGA
CATCCGCCGTGGAAATTGCCATCATTTACCAGCATATGCTCTGTCTTCGTATGTCTGAAGGAACTAAAGATTCAACGTTA
TATCTTGCTCTTTGCGCCGTCAATTACGCGGAAACTGCTGGCGAGAGTATGCCAAAACCACTTTTGGCAGAGATCTACAT
GAACGTCGCATTATGTCTAAAACAGTCCTTCTTCCCATACATACACAAATATTATCTGGGTAAAGCACGCGTCTTGTTAT
CCTCTTGCGCCGTTCCTCCGAAATTGAAATGGATCATGACCGACGAAGGCGCTAAGTTCTTGGCATCTCAAAAGTGGCAG
TACAAGAAACAGTCTGATAACGAATTCACATCACAGAACAGTCGAGCAGATCCGTTGTCATATGCGGCTCGTGCGTACAG
GCATCATCTGATCGAACAGTGTCTACGTTTATTGACCGGCACGGTTGGAGAATGTCATGCATCCTCTGTACTTGAATTAG
GACGGATGATTATGGCTTCTGCGGAAGTGGAAGCCTGTTTCCCGTATGCTGATAAAATTAGTGTAGCAACATGCGAAGAT
GAGATTGGATTATGGTGGGGAGCTGTAATCTGCGCTGCCGCGAGTTGGAGATTAGGAGAAGAAGATTCAAAGGCATGGAG
TATTGTGGAAAGTAAATTTCCCTACGAGAGGAACTTCCAAGTTGGCGACAACAGCAGTAGCAGCCCATTACCTCATGCTA
TTCTTAGTGTTCTCCAGGTGGCAAAAAATCCTACAAAGTTAGTTTCTATGCGTTTCATTGATCAAGCGGGATTACTACTC
GAGCAATCTATGGTGTACTATCATTGCAAAGAGCAATCTTCGCAGCAAGTCTTGCTTACTCAATTATTGGTTTGCGATTG
GCTTCTCGAGATACGCACAATTCTTTGGCAAGAAATGGATGTGGAACCAGAAAGATCGATTGCAAGCGTGTCTCTTGCTG
GGTTCCAGCGTGATTTGGCGTGCTTGAGACAGTTGTGTCAGCACATCCCGTCTGTATTGGCACGAGTATTCCTATATGAG
GCTACAGCACGTATCATGGCCGGAGCAACACCAGTTAAGACTCAGATTTTACTGGATCGAAGTCTGCATCACAGAAACTC
GCGTTCTTCAATTATATGTGGAAAGGATCGATCGCAGGAGCAAAATAACAGTGAGAGAGAGCATGCGGTCGCGTTATGTC
TGGCGTGCAGGCATCTACCGACGTTGCTGTTAGCCTCGCCGGGTGAACGAGCTGGAATGCTCGCAGAGGCTGCCAAGACG
CTCGAGCGAATAGGGGACAGGAAACGTCTTCAGGAATGCTACAAATTAATGCGACAACTAGGCTCTGCAATTACTGTTAA
TTAA
PEP: 
>AECH20978-PA
MADSGGWASAQENDFPNFQSNDSFNLNEVTGIDDLLTNCESELLKNELFSDEALLSELDEPMPVDGDTFNFLNINNDEFK
DFKDPAILEPSNSNVMVQSVPQNRPQRIVASTKPTVFSSQYTIPQNVNFNVQSPNVVTLAPVTQQRQLLLPAKLIKSESL
VYSKGGQTITSTPVPHQIHTLVNTTNGTVLTTGIPVVLDTDKVQINRLNTGTHVSVPRVREVKRSAHNAIERRYRTSIND
KIIELKNIVVGIDAKLNKSAILRKTIDYIRQHLQNYSAKLKAENMALKMSAQRHNLRDLYQQIQCGELTPPRSDSSEPSL
SPAPAPPSPPSPSSVKDDSDALHNLHSVPTSSIGGMKDHTRLTLCGFMLLFLAFNPLGILMNNIGRFNYDYVNTKLDGRT
ILNYPDQLESDKQPWSNIVLWFTNLILLAICLYKLLFYGDPILPTDSKVFLEIRRWRRQAEFNISKHECNQAYRDLHQCL
QYFGRSFPLSRTEVFLATTWQIVRQTLHKLWLGRWVMHISKWLSEKSERQQAETSAVEIAIIYQHMLCLRMSEGTKDSTL
YLALCAVNYAETAGESMPKPLLAEIYMNVALCLKQSFFPYIHKYYLGKARVLLSSCAVPPKLKWIMTDEGAKFLASQKWQ
YKKQSDNEFTSQNSRADPLSYAARAYRHHLIEQCLRLLTGTVGECHASSVLELGRMIMASAEVEACFPYADKISVATCED
EIGLWWGAVICAAASWRLGEEDSKAWSIVESKFPYERNFQVGDNSSSSPLPHAILSVLQVAKNPTKLVSMRFIDQAGLLL
EQSMVYYHCKEQSSQQVLLTQLLVCDWLLEIRTILWQEMDVEPERSIASVSLAGFQRDLACLRQLCQHIPSVLARVFLYE
ATARIMAGATPVKTQILLDRSLHHRNSRSSIICGKDRSQEQNNSEREHAVALCLACRHLPTLLLASPGERAGMLAEAAKT
LERIGDRKRLQECYKLMRQLGSAITVN
Swiss-ProtSterol regulatory element-binding protein 2
KEGG     K07197  SREBP1, SREBF1; sterol regulatory element-binding transcription factor 1     
SUPERFAMILYSSF47459  HLH, helix-loop-helix DNA-binding domain superfamily     
Gene3DG3DSA:4.10.280.10     
PfamPF00010  HLH; Helix-loop-helix DNA-binding domain     
SMARTSM00353     
ProSiteProfilesPS50888  BHLH; Myc-type, basic helix-loop-helix (bHLH) domain profile.     

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