Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Acromyrmex echinatior
GeneAECH21024
Positionscaffold90:942892..957611[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/aech_20/?name=AECH21024
sequence mRNA:
>AECH21024-RA
ATGGACGTCCGTCGAATGGGATGGGGCAAAGAAAAACGCGACGCGAGAACAGACTCCGGTCGGCGGGGTGGAGATAGAGA
TAGAAAGGGGTCACGTCCGTACGAAGCACGAGACCAAAAGAGGGATCAAACTGCGCACCGTCGTCGTCGAAGACGTCGTG
GAGCGTTCCCACGGGAGATCGATAGTCCGAGTGTCCTCGAGTCTTCTTTTCCTGGACGGAGCGTTGCATCATGTGATGAA
GCGGAATGGTTAAAGGATGCTGTCAGTTACGGGCGACACGACAGCCTGCAAACTGAGAATGTCGCATGGACCGCACACAT
AGGTGAAATGTCTCGCAGTCTACCAGACAGAGTGGCTGGGCTCTATTATGCCCACGGCCTATTCTGCTCCTCTCATCCCG
TCATCGTCCTCTCCCTCGCGATATCGGTTCTTTTATTATGCTGCTGTCCACTTGTCAATCTGCCTATGCCGGGTAATGCC
CCGAAAATCCTAATCAACGATACTGTCTTACCAGTAAACGACACGGAGACCTCGGTACTGTATGTCCAACAAGTGGTACT
AAGGATCGGAGTGATGCCATGGAGCGAAGACCTGACGCTGATGGATGCCTTCAGAGGACCTTTATATGAAGTATTCAATC
TCTTGGAAATCATACAAAACTATCAGCATCCAGAAACATTAAAAACACTTGGCCAAGTATGCTTGCACATTGAAGCAGTG
AAAAAAAGAAATGGCAAGAAGGCTGAGGTTTTGCCGGAATACAACTGTCTTGTTCTATCACCTGCAAATCTCTGGCAACA
AAGTATAGAGTTATTTTCTCAAGACACAAATCTTATTAACACTATATTTTCATATCAGAATTTTCAAAGAGGTAAGATAA
GTCTTGCAGAAGTGATGTTTGGGATGAGTTTAAAGGAAACAGGAGTGAAACGATATCCTGCTCGAGTTCGCCAGAGAATT
CTCCAATATGCCGTGACCATTTATTTAAAGAAATATGATCAGGAATTCATAAAAGGATTGCAGCATCGTCTGCGAACGTA
TTATCAGCTGCATCAAACCGTTGACAATAGCACGGACGTTGATGCGCGTAATGAAGTATTAAATATTTTTTATCCTGGCG
AGTTCAATTACAGTGAATTCTTCCCGTTAATGATGACTTCCCTAGCCTTATTTTTTTACGAATACTTCCAAGTGCGGAAA
ATAGAACTGGTAAAGTCTAAAATTGGCATTGCATTCAGTGCCAGCGTAACAGTGATGGGCTCGCTATCAATGACTGTAGG
TGTGTGCTTTTTCTTCGGTCTAACACTGAGCATGAGTGCCAAGGAAGTGTTTCCGTACTTGGTGATTATCTTTGGCCTCG
AGAACATTCAAGTGTTGACTAAGAGTGTCGTTAGCACGCCAGCCCAATTGGATGTAAAGATACGTGTCGCTCAGGCTTTA
TCTAAAGAAGGATGGTCTATTACGAAAAATCTTCTCACAGAAGTGACGATCCTAACTATTGGTTTATTTACTTTCGTACC
TGCTATCCAGGAATTTTGTATATTCGCCATTGTCGGATTATTGAATGACTTTTTCCTACAAATGGTATTCTTCTCGACGA
TTCTGGCGATCGATATCAGACGAACAGAATTATCCAGCGAGAATTCCAAATTTCACTTGTCGCACATTCAAACATCACGC
AGACAACAATTTACCACTACTATTACCAATAGGAAACCTCATATATTCCGCTCTAAGTCTCATCCGAGATTGAACGGTCT
GTCTACCGGTCCGACGAACGTTATTGCTCCGAATACACAAAATACTCATACACTGACCAAGATCCCCAAGCGTTTAAGAT
TGGTGTATTTATGGGCGCGAACACGAATCTTCCAGCGTGCATTTATGGTAGGAATGGTTGTGTGGATTAGCATGGCTATT
AACAATTCTGGTATCATCGAGCACATAATACATCTTAGCGAGACGCTAAAGCCAGAAACTGACATTGATGGTTATACAGT
AGACAAGCCTCCATCATTAAACGATTATGTTAAGCTAAATACGGTAACACCTATTTCTATATCGCCTGCAACTGTAGCCC
CAAATAAATTAAATGAACAGAGTCTAACTAATGATACAACAGAGGAATTAAATAAGCTAAGACCTATGGATTTTCCGCCT
TGGAATAGTTTATCACTGTATCATTGGTCTTCGATTCTTTCAATGTATAATGTGTCGGTTGCCGGTGGACGAGTGACTAT
ACTACCGACTATAAAATTATCATATGCAGTGAGCCCGCAATTAGCAAAACAAATTAGCAATCCAAATGATGTTCAACACT
TCCAGTGGCAGAGTCTCGCTACCGCTGCGCTTGATCCTTTAGATTTTTCAGATATGGAAGTACCATCGAGATCAGAAGGA
CGTGTATTTAATACGGACACGCCTTTTGTACCGTCGAGTCCGATGGAGATATTTCTAGCTGCTCTGCTGTGTCTTATTAG
CGTAATCGTGGTTGCTTATACAATGGTCGTGTTATACCGTTGTATCTGCACGAGAAATTACGCGGAGTGGCGAGCCAGTT
GGCACCAGCAAGAAAAGACGCACGATTACGTTACTCAATTAGTGCTGGAAGCTGTGCCTCTGGTCTTGGAAGGACATACT
CAGGAAGTAGAATGCATCGCGACGGACGGTAATACCGTTGCTAGCACATGTTTAGCGGGACATATCAGAATATGGGATTC
GACGTCTGGCGAGCAATTGGCGCATATCGATAGACGACAATTTTTCAGCGGTCCGCAGAAAACGCTGAGTCAAGCGTCGC
CAGATGCCGACGAGCTGATGTCAGATTACGAAAGCGGTTCGCCACCTTCCCGAGGTGAAATGGAAGTGGCACAATCGATG
GGACTTTATTCACCGGCCTCGGCAATGTGTCAGGGAAAGTTATCTCCCGCTTACAATATGCGAAGAGTTAATAGTAACAA
TAACAATGATCATAAAAGACGATCTATAGGAAATATGTTAGATTACGATTATCAACTCAATGAACTCAATAGCGACAATA
AGCAGAAACTATTACGTCGAAGCTTAGGCAGTGCCTACGATCTTCCCGATCTAAAACCGGCGATAAACATCAAATTCTCA
ACTATAAAATATACACCCTCGCAAAAAAATTATGATCAAGGCTATGACTTCGGGGAGCGATATAAAATCTTATTCGATGA
ACACAATAAGTCAATCGAGGAGATGCAAAAATCTAAAATCAGGGAACAATTAGGTGTTTTTCCCGCAAGATCGAACAATT
TAGTTGGCAGCACATCCTCCATAAATACTGATCGCACAATACAATCGTCGCCCATTATAGCGGCGATTTGGTGTATGGAT
TATCAGGAAAATCTTATAGTAGTAGGGTGCGCTAATGGCAGTCTAGAATTCTGGGAGGGCACGACCGGTAGATTCAAGTG
TCTCTTCGATGATGGATCAGCACTTGGAATCTCTGCCGTTAGACTCGTTGGTAGCAGAGTAGTGGCAGCTAAATTGAATG
GTGCTGTGGACTTTCTGCAACTTGAAAGCTACAGCGAAGGCCAGCAGATTGATTGGGGCTTCACATCTTACAGAAGAACG
CATGTGCGAACGGGAAGTGCTGGTTCGCCCATGGATCTAAATAACTATATGCAAACAGAGGAAGATTTGCGCTGCATGAA
AATTGGCTCTCATAGAGCACATCAACAAGCGATCACTGTTTTAGATAGCGAAGGTGGACGTGTATTAACAGGCAGCCAAG
ATCACACCTTGAAAGTATACAGGTTAGAGGATCAGTTACCTCTGTATACACTTCATGGGCATTGCGGTCCGATATCGTGC
CTCTTTATTGATAGAATAAGTCCCATGACATCCGGTAGTGGGTCTCAAGATGGATTACTGTGTGTGTGGGATCTTTTGAC
AGGAGCATGCATGTATAGTATTCAAGCCCACGATGGTGCTGTAGCCGCTATTACATGTTCAGTGTCCTATGTGATAAGTA
TCGGAACAGATGAAAGACTTTGTGTCTGGGAACGCTTTCAAGGACACTTACTACACACTTTGCCAGCACATAAAGCAGCT
TACAGCTTACAATTGGTGATGTTAACGCATCATCTCCTCATAACTAGCAACCAGGGATCATTAGTAGTCTGGGATGTAAG
AACGGGTGAGCCAGTGCGAGAAGTGAGACTGGGTCATAAAGACAGCTGCATTTTCGTAAAGCAAATGCTGGCATTGAGGG
ACAGCGTTGTCTGTGACTATGGTCGACAACTGAGAATAGTCAGATTTCCATTGGTCTCTGATAAGCTGGATTAA
PEP:
>AECH21024-PA
MDVRRMGWGKEKRDARTDSGRRGGDRDRKGSRPYEARDQKRDQTAHRRRRRRRGAFPREIDSPSVLESSFPGRSVASCDE
AEWLKDAVSYGRHDSLQTENVAWTAHIGEMSRSLPDRVAGLYYAHGLFCSSHPVIVLSLAISVLLLCCCPLVNLPMPGNA
PKILINDTVLPVNDTETSVLYVQQVVLRIGVMPWSEDLTLMDAFRGPLYEVFNLLEIIQNYQHPETLKTLGQVCLHIEAV
KKRNGKKAEVLPEYNCLVLSPANLWQQSIELFSQDTNLINTIFSYQNFQRGKISLAEVMFGMSLKETGVKRYPARVRQRI
LQYAVTIYLKKYDQEFIKGLQHRLRTYYQLHQTVDNSTDVDARNEVLNIFYPGEFNYSEFFPLMMTSLALFFYEYFQVRK
IELVKSKIGIAFSASVTVMGSLSMTVGVCFFFGLTLSMSAKEVFPYLVIIFGLENIQVLTKSVVSTPAQLDVKIRVAQAL
SKEGWSITKNLLTEVTILTIGLFTFVPAIQEFCIFAIVGLLNDFFLQMVFFSTILAIDIRRTELSSENSKFHLSHIQTSR
RQQFTTTITNRKPHIFRSKSHPRLNGLSTGPTNVIAPNTQNTHTLTKIPKRLRLVYLWARTRIFQRAFMVGMVVWISMAI
NNSGIIEHIIHLSETLKPETDIDGYTVDKPPSLNDYVKLNTVTPISISPATVAPNKLNEQSLTNDTTEELNKLRPMDFPP
WNSLSLYHWSSILSMYNVSVAGGRVTILPTIKLSYAVSPQLAKQISNPNDVQHFQWQSLATAALDPLDFSDMEVPSRSEG
RVFNTDTPFVPSSPMEIFLAALLCLISVIVVAYTMVVLYRCICTRNYAEWRASWHQQEKTHDYVTQLVLEAVPLVLEGHT
QEVECIATDGNTVASTCLAGHIRIWDSTSGEQLAHIDRRQFFSGPQKTLSQASPDADELMSDYESGSPPSRGEMEVAQSM
GLYSPASAMCQGKLSPAYNMRRVNSNNNNDHKRRSIGNMLDYDYQLNELNSDNKQKLLRRSLGSAYDLPDLKPAINIKFS
TIKYTPSQKNYDQGYDFGERYKILFDEHNKSIEEMQKSKIREQLGVFPARSNNLVGSTSSINTDRTIQSSPIIAAIWCMD
YQENLIVVGCANGSLEFWEGTTGRFKCLFDDGSALGISAVRLVGSRVVAAKLNGAVDFLQLESYSEGQQIDWGFTSYRRT
HVRTGSAGSPMDLNNYMQTEEDLRCMKIGSHRAHQQAITVLDSEGGRVLTGSQDHTLKVYRLEDQLPLYTLHGHCGPISC
LFIDRISPMTSGSGSQDGLLCVWDLLTGACMYSIQAHDGAVAAITCSVSYVISIGTDERLCVWERFQGHLLHTLPAHKAA
YSLQLVMLTHHLLITSNQGSLVVWDVRTGEPVREVRLGHKDSCIFVKQMLALRDSVVCDYGRQLRIVRFPLVSDKLD
Swiss-ProtSterol regulatory element-binding protein cleavage-activating protein
SUPERFAMILYSSF82866  Multidrug efflux transporter AcrB transmembrane domain superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50082  WD_REPEATS_2; Trp-Asp (WD) repeats profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

You might be interested in these researchers

You might be interested in these references