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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB16173
Positionscf7180000350191:168440..173210[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB16173
sequence mRNA:
>PB16173-RA
ATGGAGGGAGATGATGGCCCGTCAGCCATCAGTAATAAACCTACTATTATTAAAGCAGCACAAGAAGAAATAGGACGATT
AGATGTATTAGTATGTGGACAATGTCATTCTGTCTTTCATTTTATTGAAGAGTTTCAAGAACATCGTACAAAAGAGGGAG
CTTGCTCGAAAGTATCACATTTTCGTGAAAATAATGATGTTTGTATCTATACTTCGCATTTAGATTCTTCATATGAGATA
CCTAATGGACAAAAAGCACAAGTATGGGCATTTTTGTTGTGGAAAGATACACAAGTTCAACAAGAAGGTACAGATAAAGA
TACGTCTAGTGCTTGGAAATTGTACCAGAAATGGTGCAAAATGGACACACATGTGAGGGATTCGTGGATTACAGCAGGGA
AAACCATACAAACTTTTACAAAAATCAGTAATGCAAAAATGCAGGATACTCCGATACAAATTCAAACGAATGTTGAAGGT
GCCAAACCAATAATAGTACGTAAAATTATCAGAAATGGACAACCAGAAGAAACAGGAGAAGCTAAAAAAGATACCAAGGA
TACAAAATCGTTGGAAATAAAAACACAAAAGAGTGAATCCATGGATGTTGAAGTGGACAAATCAAAAGAAAAACCAAGAC
TGAAACCATCAATCAAGCCCAAGAAAAAGGGAGCTACCGAAGAGGATGCAGATTTGAGCAATGAAGAATATTTCGTTGAC
AAAATTTTGGCTAAACGTTTTAATCCAAAAAAGAGATGTTCGGAATACTTAATTAAATGGGAAGGTTATTCTCACGAAAC
CAATACATGGGAATCTGCAGAGGCTGTGCAAGCGGCTTGCAAAAATATGTTGGAAGAATTTGAGCGGAATCTCGCTAAAC
AGAAGGAACTTAAAGCGGCACAACAACAAGCTAATGCAAAAGTTGTAGGACGTGCAAGTTTGTCCACGCAAAAACCGATG
CTAAAAAGCGAAGCTAGTAAGCCTGGCCCAAGCACGGCGACGCAAGCAAGTCGTCCGATGCGGTCTAGCAAATCAAAAGC
AATGGATCAAGTGAAGCAATGGTGCGGTTCGATGAAAGACGAGGATAACGAATGTATGAGGATTGATGATACGGAGAGTG
ATTCGGAAGAAGGTGGAGGCAGCGCGGCAAAGAGAACGAAAGGTGACACGGGCAGTGATGATGAATGGACCGGGGAATCC
GAAGATGAAAGAGTAACAGGTCGTAGCGATGTGATTCAACGTGCATTCAGTCGTGCTAATGCGCAGTCCAATGGATCCAA
CAGAGCTTCGGTTTCTTCCACTGATTTGGCAACATCGTTGGGTTTACAGTCTCCCGAGGGAACGAAATCCAGTCAACCAC
CTGTTTTAGTAGCTAATGCAAAAGGGGTTGTTAAAGTCGATCCCAAGCAAATGCCAAATTTAACTTCTGGTGTTTATGTC
ATGTCACGAAAAGATGGTATCATCAAATTGGATTCATCTCCCAGTGGAAAATTAGCAGTTAAAGGATCTCCTACATCGCA
AGGTGTTCTCATGGTTCAAAATCGGGATAGTACAAACGTAGTGAGGAAACAGGTAATCTCGACGTCGCAATCAAATTCTA
TCACTCCGGTGAAAGTTGTTTCGAAGATGGATGGGAGCCAAGTAGTAACTCAAATGAAGGTGGTCACATCTAAGCCCGTT
ACATCAAAAATTGGTGGCGTGCAGAAGAACGAGCCTATAAAGATACAACCGAAACCAGATCCTTCACAATTGCAACAAAT
ACACGTTGTGACTGCGGTACCGGCACCAATAACTTTGCAACCGAGAATAACTACAGGCATAAGACCAGCTTCTGTCACTC
CTCAGCGAACAGTAGATGGTCGTCCTTTATTACCTAGACCAACATTGCGCGCTACAACGGCGACAAGTGTTCTTGGTACA
ATCCGCACTCCCGTCAGAGCACCGGCGCCAAGACAGATCCAAACCCAAGCGACGCGTCCGGTATTTCAGAAGCGTACGAC
GATCGTGAGTACGCAGCAAGCTGTTTCACCAGTTGCCACTGGCACGGTCACGCAGATCAGGCCGAAATTCGCGGTACTCA
CATCTCCGCAATCCAAACAGCTGGTCAAAACTGGAACTAGTTCAGTACAACAGCAGCAGCAACAACAATCACAACAGCAG
CAATCACAACAAACAAAACCGTCTCCGAAAACACCAGTGGGTAAGGCACAGTCATTGTTATCTCCGCAACAAAAATTATT
AATGGCAAAGAGAAAAGCCCAAGAGGCAGCTGGCATCATTAAGCCAGGTGGTCGTGGACTTATAACAGGTACACGCGGTA
TTGTAGGACGAGGTAGAGCAAAAGCAAGTACCGAAACATCTTCCGCAATAACGCAGGCAGGGAGTAAACCTAAGGAGAGC
AAATTAGCGGAAGGCGATGGACTCCACATGGAATTCCATGAAGTCGGTTCAGAAGAGAGTAGTAGCGAGGGTGAGCCAGA
TCTTCCCCCTCCTTCCGAATCAGATATCATTACGGCCCCGGAACCCGATAGTCCACCACGTCCGTTTACTTTGTGCCCTC
TCACGGGACGCATAATTGGTCCAGATGGTGAACCAATCGAGCAACCAGGTGAATCTGAATCCAATGAAGTAACAACACCT
ACGACTACGTTATCGACTACAGCAAAAACAACTACCAGCGTATCTGAAACTATGGCGGCAGACGCCACTGCTACGACTGT
CATTAGCAATATCAATACCAACACGACTACCACTACCACTATTGCCATTGCCATCGCCACTGCTACAACTACAAGTACAA
TTGCAACCACCGCCACCGCCACCGCTACCGCTGCTGCCACCGCCACTACGACAACCGCTTCTGCTGAATTAGTTTTACCC
TCTCTTGACCCTCTTACCGAAAGCAATGGCATTATGAGAGTCGAAATGAGTCCTGGCGGGACAACCGGCACCATTGTTCA
AGGTAGTGAAACGACAGCGCAAATCAATTTGTCGAATGTAGCAATACCGGCGCCAGATTTGCCTTGCTTAGACGATACTG
CTTCTACAGTAGCAGCGACATCCGCCACAACACCTTTAACAGTAAGCATTGCTTCTGGTTCTGCTGAGACATCAATTACT
ACGGCATTGTCGACAGTTCCGACAACATCCACTGTTACTATTAACATCGACCGGTGCAAAGACCGAAGAAAAGATTGCAG
AAGAAAAAAAGTAACGACTGACGATACGTCCAATCTTGTTACTATAGCCGAGCATGGCGTCGTCTATCAAGTTACGGGTC
AAGGCGAGGAAGGACAAACGCTTTTAGTAACGCATGGAGCTGATGGCGAGCAGCAATGCGTATATGTTACTACCGAGCAA
CAAGGAGATGACGGTTCAGTCTTGACATTAGATCACGCAGTTGCCGAGGCTGTAGCACAACTAATTCCCGATCAAGTAAA
TCTCACACCCCAATTTTATGTAAAGGAAGATGGAGCAGAGTCGACTGAAAGTCCAATGGTCATGTCTATAATGGATAATG
CGAATACGACAGATGTATCTGCAACTCAAGAAGATAACGACGGACAAGCACAAGTTATAGCTCAAGTGGTACAAGCTGAA
GAACCCACTCCAGGAGGAACTAGAAGGGTAGTGCTCCTATTACCAGATGGAAATTTAATGATGACCGAAGTGGATGAAGA
GCAATACGCTGCTCTGGAACTTGACAAGTGAAAATGAATATCATTTTGTGCATATGCTAAGGGAATACCATGGCAATGCA
TCAAATTGCACGTTACGCGCAAATTGTAC
PEP:
>PB16173-PA
MEGDDGPSAISNKPTIIKAAQEEIGRLDVLVCGQCHSVFHFIEEFQEHRTKEGACSKVSHFRENNDVCIYTSHLDSSYEI
PNGQKAQVWAFLLWKDTQVQQEGTDKDTSSAWKLYQKWCKMDTHVRDSWITAGKTIQTFTKISNAKMQDTPIQIQTNVEG
AKPIIVRKIIRNGQPEETGEAKKDTKDTKSLEIKTQKSESMDVEVDKSKEKPRLKPSIKPKKKGATEEDADLSNEEYFVD
KILAKRFNPKKRCSEYLIKWEGYSHETNTWESAEAVQAACKNMLEEFERNLAKQKELKAAQQQANAKVVGRASLSTQKPM
LKSEASKPGPSTATQASRPMRSSKSKAMDQVKQWCGSMKDEDNECMRIDDTESDSEEGGGSAAKRTKGDTGSDDEWTGES
EDERVTGRSDVIQRAFSRANAQSNGSNRASVSSTDLATSLGLQSPEGTKSSQPPVLVANAKGVVKVDPKQMPNLTSGVYV
MSRKDGIIKLDSSPSGKLAVKGSPTSQGVLMVQNRDSTNVVRKQVISTSQSNSITPVKVVSKMDGSQVVTQMKVVTSKPV
TSKIGGVQKNEPIKIQPKPDPSQLQQIHVVTAVPAPITLQPRITTGIRPASVTPQRTVDGRPLLPRPTLRATTATSVLGT
IRTPVRAPAPRQIQTQATRPVFQKRTTIVSTQQAVSPVATGTVTQIRPKFAVLTSPQSKQLVKTGTSSVQQQQQQQSQQQ
QSQQTKPSPKTPVGKAQSLLSPQQKLLMAKRKAQEAAGIIKPGGRGLITGTRGIVGRGRAKASTETSSAITQAGSKPKES
KLAEGDGLHMEFHEVGSEESSSEGEPDLPPPSESDIITAPEPDSPPRPFTLCPLTGRIIGPDGEPIEQPGESESNEVTTP
TTTLSTTAKTTTSVSETMAADATATTVISNINTNTTTTTTIAIAIATATTTSTIATTATATATAAATATTTTASAELVLP
SLDPLTESNGIMRVEMSPGGTTGTIVQGSETTAQINLSNVAIPAPDLPCLDDTASTVAATSATTPLTVSIASGSAETSIT
TALSTVPTTSTVTINIDRCKDRRKDCRRKKVTTDDTSNLVTIAEHGVVYQVTGQGEEGQTLLVTHGADGEQQCVYVTTEQ
QGDDGSVLTLDHAVAEAVAQLIPDQVNLTPQFYVKEDGAESTESPMVMSIMDNANTTDVSATQEDNDGQAQVIAQVVQAE
EPTPGGTRRVVLLLPDGNLMMTEVDEEQYAALELDK
Swiss-ProtChromodomain-helicase-DNA-binding protein 8
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF00385  Chromo; Chromo (CHRromatin Organisation MOdifier) domain     
SMARTSM00298     
ProSiteProfilesPS50013  CHROMO_2; Chromo and chromo shadow domain profile.     
CoilsCoil
ProSitePatternsPS00598  CHROMO_1; Chromo domain signature.     

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