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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB18319
Positionscf7180000350249:246709..249732[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB18319
sequence mRNA:
>PB18319-RA
ATGGACTCCCCGCCATCATGTTCACTGAGTGCTGGGCCTCTCAGTGATCTTGGTAGCAGTGGCCTGGGGGGTTCAATATC
CAGCGATTCTGTTAGAGCACATCTTGCGATGGAGATGCAGGAGAGTGATATAGAGAGCAAATCTCTATCGCAAGATTCTT
TTGATTATTCGGATGGCATGTGTGGCGAAAATTTTAACACCCTGAAGAAGGGTCCAGGCTGGGGTGACACGGACGGCAAG
TTGGAGGTCGATGTGGCGATCAAGCCACCACCAGAGTTTCAGGATAGTCCGTCACCACCAGACTCGGAGTCTTTGTCGAT
GCCGATTCTGAATTATGCACGGTTAATGCATAGACGCAGAACACCGCGATGGATCGACGATTATGCCGAAAATCTAGTGC
AATCGGTGATAGAGGAAGCATTAGCAATTTCTTGTCGCATCTCTTGGCCAGAGGGTAGGATCGCGCCTGTTACAAATCCA
GTTCCAGTCGTGACTCGATCCCAACAGATCAATCTTAAACGCATGTGGGATCTAATGACGCCACCAGTATGCCAGGGAGC
TGCTACCATCACTATTACTCCGTATAATACACTGAACCGGCCAAATTCACGCTGCTCTCTGGCTTCCTCGCGGCTATCCA
GTTCACACAATTCCATCAATACTACTGGGCTTGGGCATAAGGCTGATGATAGCAGCTTCATCACATCCGCGATGTCGCAT
GATGTGTTAACTACAAGTGAGATTAGCGACATGTACAATGTACCCTTTGATTCGGACATTTACACAGTGCCAATCGACGT
GGTGCGACCGCTGCATGATTTGCGAACGCCACAGAGACCCAAACGACATCGACATCATCGCAAGAGACGGCGAAACGTTT
CCGCGAGTTCGCAGAGCGAGTTGGAAGCACACATCCAGCAAGCACGTCATTATTGTGGCAAGTCTCGCGCCATCACGCAT
GTTATTAAATCGCAGCGCCTGTTGGCTGATGTGTGCTGCAACGAGGGCAATCCTACTGTCGGTGGCGGCAGTGGTGGTAT
TGGTGTTGGCAGTGGCAATAGCGGCGGCAGCGGAGGTGGAGGTAGTGGTGGCGGTAAAAGACACAGCGTGCCAGGCACTT
CCGGTCGTCATAATGTCAAAGCATCAAATGGACATGCACACAATATCGGTGAGCCGATCCACATGACACTACACGAGGTG
CGACAGTACCTGCAAACGTTGTACTCGAGCTCTAGCGATTCTAGTGAAAACAAGATCAAACGAGACAAGGCTCCTCTACT
AGGCCATACGCCGGTACATCTCGCAGCAACACCCAAGCCCCTCAGTGTAAATAATAATAATAGGTATAACAGTAATGCGC
ACACGGACTCGTCCACGGATACACCGGTGTTCAATAAGAGTACTAGCAACGGCCTGATGATCCACCACCATAATAATAAT
AATAATAATAATAATAATAATAATAACAATAATTCTAATAATGCAAAGAAGCATAAAAGAAACGCATTCGTTGGCATTAG
GCACAAGAAAGTGCGTGACGAATCGCATAAGGAGAAGAGTGAATCTGAAAGGGAAAAGATAAAAAAAAGTCAGCGTAACT
TCTCACTAAATCTCAAGCAGACGCTCTGTAATATCTTCCGATTTCGACGACTAGGCTCTCCGGACCACTTTGTAGAAAAA
CGAAATAGCATCGTGCAGGGTGAAATTGTTGAGGAAGAAGAAGGTGTTGACTCTGACCAGCATGCAAACAACAATAACAC
CGCTCCGTCTGAGGTAGAGCCGTCCGCACAAAAGTTGCCATTTTTCAAGCGCGCTCTGCCACCTTTGCCTAAGAGTAACA
GTCAAGTCGGTGTGGAGCAGGCAGAGGAGGCCCTTACAGCGATGGCACCCAAGTGCGAATCTCCGAGTTCGGCACAGCAG
CAAGTTCCATCGATCAGACCAGAAGCCGTGCGACCAGAAGAGGATACTGCGGAGGATACAAGCATGGATTTCGCAGCCAG
TATCGAGAAAGTGAAGGATTACGGATGGTATTGGGGACCTATATCGGGTGAAGCGGCGGAGAAAATACTATCCAATGAGC
CAGATGGCTCTTTTATTGTGCGAGATAGTAGCGACGATCATTACATCTTTTCCTTGTCGTTCAGACTCAACAGCTGTGTA
CGACATGTAAGGATAGAACACGATCAGGGTAATTTTAGCTTCGGCAGCTGCACAAAATTCAAATCGCATACTATTGTTGA
CTTTATTGAGAACGCAGTCGAACATTCGCGCAGCGGTCGTTATCTCTTCTTCTTGCATCGGCGACCGGTCCTGGGCCCGA
TGCGAGTACAGCTGCTCCATCCAGTATCGCGCTTTAAACAGGTACAGAGCCTGCAGCACACGTGCAGGTTCGTCATCCTG
AAGATGGTGCGCAGGGACTTGATCCCGACTTTACCATTACCCCGCCGGCTCATCGACTATCTCAGCACGCCCCATTATTA
CAGCGAACAGTTGGCTGCCGAACAGGATGACCGAGCCGAATCACCAGTCAGTTCGTCGACCGGCGAACTGGAAAAGATCT
GTTTCACGCCACAGGGTCTCTCGTGA
PEP:
>PB18319-PA
MDSPPSCSLSAGPLSDLGSSGLGGSISSDSVRAHLAMEMQESDIESKSLSQDSFDYSDGMCGENFNTLKKGPGWGDTDGK
LEVDVAIKPPPEFQDSPSPPDSESLSMPILNYARLMHRRRTPRWIDDYAENLVQSVIEEALAISCRISWPEGRIAPVTNP
VPVVTRSQQINLKRMWDLMTPPVCQGAATITITPYNTLNRPNSRCSLASSRLSSSHNSINTTGLGHKADDSSFITSAMSH
DVLTTSEISDMYNVPFDSDIYTVPIDVVRPLHDLRTPQRPKRHRHHRKRRRNVSASSQSELEAHIQQARHYCGKSRAITH
VIKSQRLLADVCCNEGNPTVGGGSGGIGVGSGNSGGSGGGGSGGGKRHSVPGTSGRHNVKASNGHAHNIGEPIHMTLHEV
RQYLQTLYSSSSDSSENKIKRDKAPLLGHTPVHLAATPKPLSVNNNNRYNSNAHTDSSTDTPVFNKSTSNGLMIHHHNNN
NNNNNNNNNNNSNNAKKHKRNAFVGIRHKKVRDESHKEKSESEREKIKKSQRNFSLNLKQTLCNIFRFRRLGSPDHFVEK
RNSIVQGEIVEEEEGVDSDQHANNNNTAPSEVEPSAQKLPFFKRALPPLPKSNSQVGVEQAEEALTAMAPKCESPSSAQQ
QVPSIRPEAVRPEEDTAEDTSMDFAASIEKVKDYGWYWGPISGEAAEKILSNEPDGSFIVRDSSDDHYIFSLSFRLNSCV
RHVRIEHDQGNFSFGSCTKFKSHTIVDFIENAVEHSRSGRYLFFLHRRPVLGPMRVQLLHPVSRFKQVQSLQHTCRFVIL
KMVRRDLIPTLPLPRRLIDYLSTPHYYSEQLAAEQDDRAESPVSSSTGELEKICFTPQGLS
Swiss-ProtSH2 domain-containing protein 4A
KEGG     K04700  SOCSN; suppressor of cytokine signaling, invertebrate     
SUPERFAMILYSSF55550  SH2 domain superfamily     
Gene3DG3DSA:3.30.505.10     
PfamPF07525  SOCS_box; SOCS box     
SMARTSM00252     
ProSiteProfilesPS50225  SOCS; SOCS box domain profile.     

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