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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB18340
Positionscf7180000350249:289036..295101[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB18340
sequence mRNA:
>PB18340-RA
ATGTGCGATAATATAAGTAACAATCCGTTCGCCGGATTGTTTTCGGATAATGCTGTCTCATTTTCTTCGCAGCAACATAT
GATCAGTGTTGGAAGTAACGATGCGAATTATATGAAATGCTCATCAGACGCGATTAAAAATGAAACCGAGAACGCGACGA
CGGAAACTACAAACATTGATGAGAAAGTCGATGAGCTCATGGCACATGTATTCGGTTTGACATTGCGTCGAGATAGCGGC
GAACATTCATCCAGTAGATCTCTGATATATATTGATGCCGATTCGATGGAGCATGCAGTCTTTGAGCGTTTAATGCTGCC
AAATCCTAAAGCTGAAACACGAAATGTCGATAGCCATGTCGTTCAAACACAAACTCTAATTTATCTTTACGAATGTTATT
GTCGTTTAAAACATTATCAAATGAACAATGATGATTTGGAAGAGACTATAAACAACGCTTGTCAAATTGTTCTACGAAAC
GCCAATACTGCTTTACAAGAACCTGATTTGTTTCAGAATCAGGATCAAGATTTGATCAATAGCCAGATTCATAGTCAATT
TATTGCTCTGTTTATGGATGATACTATATCACAGTTGGAATTACCATCATTTATTAATGATGTAGTAGAAGAATTAATAG
CAACAAATACAGAATGTGATACAGAGGATATAATTGCAAAATCATTCTCTCCGATCCTTGATATTATTCAGAAAGAAGCA
GCTCAGAGTAATCTTTTTAACTTTCGCAAACAATGGTTTGAGCTGCTGAATGTATTTGCCACCATTGATCCATTAGCAAA
GTTGTTAATTCTTCATAGCACACCAAAGAAAAGTCACGGTTTTGCATATTCGGATACTTTATTGGGCGCATTCTTCAACT
TGAGTTGTTTACCAAAAACACCTAATGATCCATATAATCTTTTTGATAAACCTGCGCATTCAGACTCAGTCATGGAAGGT
ATATGGATCGGCATGAATAGTCTGAGTGAAGGCCTACATAAAGTTTTCCACTCCTTATTAAAATGTTCAATGGAACTTCG
TCACTTGACCTTACAATGGTTAGGTAACTGCCTTCATACAAATGCAAATAGGGGAAAACTTTGGAACACTCATATGGAGA
TGGGATTATTAGGGGTGCTATATGTGTCGGATGGTTTTATGTTGAATATAGGCAATGTATTGTTACGTCTTTGTCAACCA
TTTTGTGCTAAATTAAATGATACTAAAGTACCAAAGATAGATCCTACATACTGTAGTGCAGAGGTTGGTTTTCCGAAAAA
AAATTCAACAATGAAAGATGAAGCCGAGAATCTACAATGTGGAGTACATTTGAAAGGATTGAGTTCTGAGACGTGTTTGA
TACCAACTCCACAAGGTGAAAGTCGACCAATGTCGAATTCATTCGGATTCATAACGGAATGCTTTTTTCTCACACATCGT
GCATTAGATCTTGGTTACAAAATTATCATGGATAAATTTATAAAGACAAACGAAGATTTATCTATAATACAAAGATATTA
CAATGATGCTTTAGAATCATCCAGAGAATTCATCAGTTCAGAAGAAGTGGAGCACCTGTCACAACAATTGGAAAATCAGG
CATCAAAATATTTCACTTTTAAAGCAAGTTTATTAGTACCAGAAATGTTAGAACATATGGTAAATTTTCATGCGATGACG
GCATTTTGGTTAACACAAGTCAGTTTGCACATTGCAACTGAAGAAGAGGAAAAAGAAAATTTTATACCGAAACGATATAC
ACCTATTACATTCCCGTTACCAGAAATTGTTCCAATCACACTAAGTCCAGACACATTCGAGAAACATGGTTCGAATTTTC
TGAATCCAATTTTGACAGAGATTATAGTTTTGATGGAATCTCAGCATCGTTTATATAATCCACATCTGCGAGCGCGTTTA
GCTGAAAGTCTAGAAGCGCTTTTGCCGATTACAGACGATTATGTCACTCAAGATAACTTGAGAACACCTAATTTAGGAAC
ATTTCATAGAGAACAGCTGTTTCTTACTCATCCATATAGACAGCAGGCAACTCAAGAGGCGGAGAATAACATGGAAGCAG
TTCAACCACCTCTGTTTCTACGTTTTATTAATTTGTTGATGAATGATGCTGTGTTTCTCTTGGATGAAGCCTTATCAAAT
ATGACACAGTTAAGACAAATGATTCGAACTAGGGACAGCGGAGAATGGCGTTATCTACCAGAAAGTGAATACGAGCAACG
AAGAACGAATCTTGAGCATATTGGTTTGATTGCTCGCTTTGATAATATTTTGGGTAGGAAAACTATACAAACGATAAAAA
TGTTAACTACTGAAATAAAATCAATTTTTTGTCATCCGACTATGGTGGACCGTATTGCTTCTATGCTCAATTATTTATTA
TTACAACTAGTGGGACCAAATAAAAAAAATCTTAAAGTGAATCAAAAACAATATGCATTCAATCCTGCAAATTTGGTGTT
AAATATTTGTGAGATATATATTAATCTAAGTAAGAATGAAAGCTTTACGCTTGCAGTGTCGCAAGATGGACGTTCTTATA
AACCAGATTTATTTAAATTGGCTGGTAATGTGCTCGTTCGTATCGGCGGTGCCAGAATTTTGAGAGATCTGGATCAATTT
GGAAAAAGTGTAGAGGACGCTGCCAATCAAAAGCGAGAAGAGGATGAAATTTTGACGGGTATTCCCGAGGAGTTTCTAGA
TCCAATTATGTCAACTGTTATGACGGATCCTGTTATTTTACCATCATCGAAAATAAATATCGATCGTTCGACTATAGCAA
GACATTTGCTCAGTGATCAAACTGATCCTTTTAATCGATCTCCACTTACAATGGACATGATAAAATCGAATGTCGAACTT
CAACAGAAGATACAGGAATGGATTTCGCAAAAAAAACAAGAGAAAATGTTAAGCACTGATACATAA
PEP:
>PB18340-PA
MCDNISNNPFAGLFSDNAVSFSSQQHMISVGSNDANYMKCSSDAIKNETENATTETTNIDEKVDELMAHVFGLTLRRDSG
EHSSSRSLIYIDADSMEHAVFERLMLPNPKAETRNVDSHVVQTQTLIYLYECYCRLKHYQMNNDDLEETINNACQIVLRN
ANTALQEPDLFQNQDQDLINSQIHSQFIALFMDDTISQLELPSFINDVVEELIATNTECDTEDIIAKSFSPILDIIQKEA
AQSNLFNFRKQWFELLNVFATIDPLAKLLILHSTPKKSHGFAYSDTLLGAFFNLSCLPKTPNDPYNLFDKPAHSDSVMEG
IWIGMNSLSEGLHKVFHSLLKCSMELRHLTLQWLGNCLHTNANRGKLWNTHMEMGLLGVLYVSDGFMLNIGNVLLRLCQP
FCAKLNDTKVPKIDPTYCSAEVGFPKKNSTMKDEAENLQCGVHLKGLSSETCLIPTPQGESRPMSNSFGFITECFFLTHR
ALDLGYKIIMDKFIKTNEDLSIIQRYYNDALESSREFISSEEVEHLSQQLENQASKYFTFKASLLVPEMLEHMVNFHAMT
AFWLTQVSLHIATEEEEKENFIPKRYTPITFPLPEIVPITLSPDTFEKHGSNFLNPILTEIIVLMESQHRLYNPHLRARL
AESLEALLPITDDYVTQDNLRTPNLGTFHREQLFLTHPYRQQATQEAENNMEAVQPPLFLRFINLLMNDAVFLLDEALSN
MTQLRQMIRTRDSGEWRYLPESEYEQRRTNLEHIGLIARFDNILGRKTIQTIKMLTTEIKSIFCHPTMVDRIASMLNYLL
LQLVGPNKKNLKVNQKQYAFNPANLVLNICEIYINLSKNESFTLAVSQDGRSYKPDLFKLAGNVLVRIGGARILRDLDQF
GKSVEDAANQKREEDEILTGIPEEFLDPIMSTVMTDPVILPSSKINIDRSTIARHLLSDQTDPFNRSPLTMDMIKSNVEL
QQKIQEWISQKKQEKMLSTDT
Swiss-ProtU-box domain-containing protein 29
KEGG     K10596  UBE4A; ubiquitin conjugation factor E4 A [EC:6.3.2.19]     
SUPERFAMILYSSF57850  RING/U-box superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF10408  Ufd2P_core; Ubiquitin elongating factor core     
SMARTSM00504     
ProSiteProfilesPS51698  U_BOX; U-box domain profile.     
CoilsCoil

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