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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB20236
Positionscf7180000350298:387293..391341[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB20236
sequence mRNA: 
>PB20236-RA
ATGTCAACTCCAAAAACAAAAGGTGGCTTATTTTTGGCTTCATCCCTCTGCGATGGGCTTGAGGATAATAACATAAGACA
AGTGGCAACTCTCTTATTAAATAAAGATGCGGATCCTAATGTCTTGATTCCGGCACACGGAATTACTCCATTTCATTTAG
TTATCGGTAACGATTCAGAGGAATTTGCAGAGGAAGTGACCAAGCTGTTCTTACGTCATGGTGGCAACCCCAATGTGAGA
TCAAATGATGGTATGACTCCAGTTCACGTAGCAGCAGCTTGGGGCAGGATAAACATACTGCAGTTGCTTCTGGCAAACGG
TGGTGATCCATTCTGCTTGGACAATGATGGACGTAGTCCATTTCACTATGCCTTCGATGGAAAGTATTTTAAAGCCATCA
CATTACTTTCAAATTACTGCACAAATATTCAAGACGAGGATGACAAACCAAAGTATAATATGGAACTTGATAAAGTTTTA
ATTACTACTGGGGATATGATCGCCGAATATGTTGCATCAAAAGATGTGTTAGATAGTACGCTTGCTTTACAATTGGAATC
TTCCAATTGTAAATTAAACTCTTCTTCGATGATTGTAGACACGAGCCTTGTTACAGATGCACGCGCTGTCATTGAAACGA
AGTACAAACTGGCAAATAATTTAGATGGCTGTAGAGCTAATAATATGGCGACCGCTCAAATACAGAATAATCTTTTGCAG
ACTGATGAGGAAAAGATACAAAATTATTCGTTTGTCGATCTCGATTTCGACTTTGCAAATTTACATCTTTCCGATGTCAT
GCAAAAGGAAAGGTGCCTCCCAAAGAATTCATGTAAAATAAAGAATAATCCTGATAAAGATACCTTAAAACTTGAGACTT
TGAATATAAAAAGACAATACTCAAAGCATAATATACGAAACACTTCTAAAAGAAAATGCAAAGATATCTCCGACAAGATT
TCTTTAACACCGACTCGCGTCTTAAATAATTCTATCATTAGCATGTCACCGAACTTTAATACGCCTAATCATAGAAAAAA
GAGAAATGCTTATAAAACTCCGTTAATACCATCACATATTTGCGATGATTCTATCATTAGCAAGTCACCTAATTTTACAC
CAGTCTGTAAAAAAAGAAATCTGACAAAGATCTCATGTACAGATGACTATTCTCCAAAATTCAAGAAATCTCGTGAATAC
AAAAACCAAATGTCTGAGTTTAATTGGGATAAAAAACATATTGCTCAGTCAACACCGAGAAGAAAAAAACGATCGATATA
CAGGTTCCATTCGAGCCGAAAAAGATTTGATCCTTATCGATATGAAAGTGATGTTACTTCTGATGAATTTACTTCTAATA
AACTAAAGTTAATTGATTTGAACAAAACTATTTTTTTGGGAACATTTAGAGATACAACTCGTTACGATATTCTAGATACA
AGTAGTGAATTTTCATCAACGAATTTTACAAAATCTTCAAAAATAAAACGAAGCAATCTGTGTAATAATGATTTGGCAAT
AAAGTTGGATGAAAGAAGATATGATGAAGATAGTACAATGGATGATAACAGTGATGCAAATATCTTAGATACAAGTAGCA
ATTCTAATCAAATTGAGAAAGAGAACGAAGAACTTCTTGATACTTTCAGCAATAATAAGATATATCTAAAAGATAAAGTG
AATACTGAATTTATAACAACCGAAACAATACATAATATAGATAAAATACCAGAAAAATCGATAGATATTTTTACTAGTAA
TATAAAATCTACGTGTCCAATCGAATCTGATTCGTCGCATAAAGAAAATTCTGTAGATTGTGTCGATTGTGATACTAAAA
AATTCTTAAATGAAGATCTAAATATGAATATAAGTAAGACCTGTAATTTTCATGCGAAAAATTGGTGCAATGACAGCTTT
CATGAACTTCCATTACATAACTCGCCTAAAGAAAATAATTCATATAAGAAACGAATTTGTTTATCGGATTCTCGAAACTC
GTATTCTTCAAGAAGAATCGATTCTAAGAGGATACAGGATTTGATGCTGAAGACAAAAAACTTAGACGTGCATCAAACTG
AAGATTCGTCTCTGCTTTCATATGTTAGTGCTCAAGAATACAAATATGAAGATCCAGAAAAAGGTGTAATTCTATTAGAA
CGACGATTTTGCGTTACACCACTTAGTACTTCCAATAGAACTGAACACGATACCAGAAGTAAAACGACTATGTCTGATGT
TTCAAATGCATCCACTTCTCGAAATTTGCCAGAAGAGCTATTGTTTATTGATGATGTTGCTCTTAGACGAGAACTTAAAC
AACTTGGTGATCAACCTGGTCCGATCATCGATACAACCAGACCGCTTTACAAAAAACGTCTTTTGCGTTTAAGAAGTATT
AAGGATGTTAACCCTACTTCATCAAATTCGCAGAATCTTCCAAGAAATTACGCAAGATTGAACAACAACATTAGATCTGA
TTTAGAGTTTGGACAATGGATAAATCATTTGAATACTTACGAAAGTCTGGAGAAACAAGTATTTCAAGAATTTGCATTTC
CAGATCCGTCTCGGAGATGGCGGGAGGGCACATCAAGAACATCATTCACTTATTTGTTATTAGATCCGCGTATAACGCAA
AATCTACCAAATCGTAGTCTCACAGAACCAGAAGTTTGGTCGACTTTTTATAACGCTATATTTTACATTGGCAAGGGTAA
ACGTTCCAGACCTTTCGCTCATCTCTATGATGCTTTCAAGATATGGAGGGATGGCTTGAGCACCACAAACGAAAAAATCA
AATGCATTCTTGATATATGGAACAGCGGTCATGGTGTGATATGTTTGCATGTGTTTCAAAACATTATCCCAGTGGAGGCT
TACACGAGAGAGGCTGCCATGATAGACGCGATCGGAAAGGAGTACTTGAAAAATTCTAGAGGCGGCGAGTATTACGGCAT
CGTAGCAACATGGAGCATCAGACAAAAACGAAATTTGGTAGATACTTATTATATAAAGCCTTGCAAATTTTTATGTTGGA
GGGAGAAAGGCAGCTTTTCCCCAATGATTTATGATGCGAGCAAAGTAAGATAA
PEP: 
>PB20236-PA
MSTPKTKGGLFLASSLCDGLEDNNIRQVATLLLNKDADPNVLIPAHGITPFHLVIGNDSEEFAEEVTKLFLRHGGNPNVR
SNDGMTPVHVAAAWGRINILQLLLANGGDPFCLDNDGRSPFHYAFDGKYFKAITLLSNYCTNIQDEDDKPKYNMELDKVL
ITTGDMIAEYVASKDVLDSTLALQLESSNCKLNSSSMIVDTSLVTDARAVIETKYKLANNLDGCRANNMATAQIQNNLLQ
TDEEKIQNYSFVDLDFDFANLHLSDVMQKERCLPKNSCKIKNNPDKDTLKLETLNIKRQYSKHNIRNTSKRKCKDISDKI
SLTPTRVLNNSIISMSPNFNTPNHRKKRNAYKTPLIPSHICDDSIISKSPNFTPVCKKRNLTKISCTDDYSPKFKKSREY
KNQMSEFNWDKKHIAQSTPRRKKRSIYRFHSSRKRFDPYRYESDVTSDEFTSNKLKLIDLNKTIFLGTFRDTTRYDILDT
SSEFSSTNFTKSSKIKRSNLCNNDLAIKLDERRYDEDSTMDDNSDANILDTSSNSNQIEKENEELLDTFSNNKIYLKDKV
NTEFITTETIHNIDKIPEKSIDIFTSNIKSTCPIESDSSHKENSVDCVDCDTKKFLNEDLNMNISKTCNFHAKNWCNDSF
HELPLHNSPKENNSYKKRICLSDSRNSYSSRRIDSKRIQDLMLKTKNLDVHQTEDSSLLSYVSAQEYKYEDPEKGVILLE
RRFCVTPLSTSNRTEHDTRSKTTMSDVSNASTSRNLPEELLFIDDVALRRELKQLGDQPGPIIDTTRPLYKKRLLRLRSI
KDVNPTSSNSQNLPRNYARLNNNIRSDLEFGQWINHLNTYESLEKQVFQEFAFPDPSRRWREGTSRTSFTYLLLDPRITQ
NLPNRSLTEPEVWSTFYNAIFYIGKGKRSRPFAHLYDAFKIWRDGLSTTNEKIKCILDIWNSGHGVICLHVFQNIIPVEA
YTREAAMIDAIGKEYLKNSRGGEYYGIVATWSIRQKRNLVDTYYIKPCKFLCWREKGSFSPMIYDASKVR
Swiss-ProtAnkyrin repeat domain-containing protein 16
SUPERFAMILYSSF63451  LEM domain superfamily     
Gene3DG3DSA:1.25.40.20     
PfamPF12796  Ank_2; Ankyrin repeats (3 copies)     
SMARTSM00248     
ProSiteProfilesPS50954  LEM; LEM domain profile.     

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