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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB18428
Positionscf7180000350252:75459..89569[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB18428
sequence mRNA:
>PB18428-RA
ATGGGCGGTAATTCTCGAAGAGGTGAATTTCTAACCACAATCTTGCATCCTGATCATGCCGAAGATATTAGAGTTATTAA
AGATACAGATATAACATGTACTTCCTGTGGTGATGAATTGAATGTTGATACAAAGCAAATCTTTTCTCATCCTCTGATTG
GAATACTACAGTGTGAGACATGCTGGAATCACATTAAGAAAATAGAGGTGAAATTTTATGAAGATAAAACTGAGACGTGT
TATATATGTGGCAACAGCAAGAAATTATACGTGTGCTCTATTGAAGACTGTTACTCGGCATTTTGCAAGGGATGTATAAA
GAGGAACGTGAGTTTGTCATTGTTGGATGCAGAAAAGAGAGATTGGAAATGTTTTATATGTAATCCTAAACCTATTTGGA
ACCTGAGAGCTATATGCGCTGTTATAATGAATTCTCTTTGCAAAAAGGGTAACAGGAGAAGCAAGAGTGAAAAACATATT
TTGCCATCTCAGGTACAACGAATAGAAAAAACGAAAGAAATACAAAAAGTTTTGCAAACGATATGCGACAAAGAGGACGA
CGATAATGATAATCCAAGAAATTATGTTTCGATATTCATGCGAAAAGCGGATAAAAATCGGCAAGAAAGAATATCGGAGG
AAGATCTGACAGATTCGAACAGTGAGGATTCCTTGTTATCATCTAAAGACAACAAAAAAGGTAAAAGCAAAGATAAAAAA
TCAAGATCTGCACGAAGTGGTTCTATCCCGAGACGTTCAAGGTTAAAAGAAAAGATTGGATCAAGAAAAAACCAAATATC
CAGCGATGATGATTCTACCGATACGTTGATGAATAAAATAACGAGATCTAATTGCGATTGTGTGCACCTTTCTGATAATG
AAAGTGACGAGTATGACGCCACAAGCAAAATATCGAAGAGAATTTCAAAAAATACTAGACAACAAAAAGAAAAAGCTAAT
ACAAAATCGAAGGACATGAAGAAGCGGTGTGACTCCACTAGTGAATCTGAAGACGAAGTCAAATATAAAACGCGAAGTAC
AAAACGTTCTACGAATCGTGCAACATCGCACAGTAGTATCGATGAACCAAAACATAATGAATTGTCAAAAAAGCGATTGT
CTATCTCCCGGATCCCGGAAGATGATTCGGATAACAGTTCTAGCAATAGTTCTAGCAAAGAGTTTCAGAAAATAAAACTT
CAAAAAGTGAATCGCGACAAATATTCCAAGAGGCAGTTGGCAGATTTAGAAATAGATCATACTAAGTCACCCTGTGAGAA
AAATTCTGCGAATGATAAGTGCGAGGAAGATGGTAAACAATCAAAGAATTTTAACGATGTAAAAAAAATTTTAAAGGAAT
GTAAACAGATATGTTCGAATTTTCTGATACATATAGAAACTATAGAACAATTATATAGTAAGCAGAATGAAGAACAATTG
ATATTGAAGTCTACAGAAAAAATTAATAAGTTGAAGACAGTAATAGAGAAAAAACAAACGGATTTGATAACCTGTTATCG
ATCATGGTCTAAGAATAGAAAAAAATCTGGTACAAAGAAATCAAGCAAGGTAGTTAGTAATAACGAGGAATCTTTGCAAG
AACATGAAAAATGCATCTCTAATGACAATCAAGACGTGAATAAAGATGTGTCTGAATGTGACAGCGAAGAAATATTTTCA
GCGGACGAAACAAAATCACCGCAAAAGACGCAAGTGACTCGGCAGGTAGATGCGTCAAAGAAGAAAAACATAAATGGAAT
TAACATTGATGATGAAGACAGACCAAAAGATAATGACGAAAACAGCGTGGAAAATAATTTGGCCAGTTCTCCGGTGTTGA
ATCCTTGCAAAAAAAAGAAAATTAGTACAGAACAGTCAAATAAAAAGCACTTGTTTTCAGAATGTGATAAGAGTAACAAT
GAGGAACAATTAACGGATGCAAATACTAATACTAACGATAAGCAACTGAACTTAAATACTGATATCCATAATAATGAAAT
CGAGATTGAAGATTCTCCCTTGAGACATGGCAGCAAGGAAATGACATTAGAAAATGAAAGAGATAAATCTTATGAAAAGG
ATATACTCGACGAGTCGATAGATATGTTTGACGTGTCTTTCGATGTTCCCGAAAATGTAGAAGAAAATAGAACAGAAAAA
GAAACGGATGTAGAAACGAATCATGATAAAAGAAAGTATACATCTATAGATGAAAATTTAGATACTTGTCAGAATTCTTT
GCAAGATGAAGTTTCACATAAAAGAAAGAGTAAATCTCTTTCGTTTCATAATAATGAAGAAGAGAGAGATTCATTAGATC
AAAATACAGTTGCGCCTGTATTTGCAACCAATGAGGAAGTTCAAGATAACTCGAAAACATCTCAAAAAACGAATGTTGAT
GACAATGAATCTCTCGATGATGCTGAAGCATTGGCGAAGAAAGCTCTGTTAGAGACAGATTCCGATTTGTCGCCAATTGG
AAACATAACTGAACAAATTGAAGATCCGACTACAAATGATATTAATCTAACTAAAAAGAACAACGATGCGGAGGATAACG
ATTTTGATGTCAATAGCGTTAGTACAATAATATTTTCGGCACTTGAAAATAAAACGAATGAAAATATTGAAAAGGATGTT
GTCGATGAAATCGAAACTGAAATAACGAAGAAAAGTATTGATAAATTAGATAAGAAATCTCATCAAGAACTGAATTCATC
GGATGAGGATGCTAAGGCAGAGAAAGCTGCCAAGAAAGCTCTTTTAGAATCAAATTCAGATGATTCTACAGTTTTGTCGA
CGGAATCGGGAAAGGTTATTGACAAAAAATCTGAAACAGATTCTTCTGAAAAGAATGCCAAAGCGAAACTGGCACTCTTA
GCATCATCCAATAGTGAAAGCTCCACTTCTGAATCTATTTCATCCGAAAAGACAAGCGTGTCGATGAGTACAAAAAATAT
TAAACATAATCATGAATCTGAAAGTGATGAAGAATCTATAATTTCCAAGTTGAAAAGGAGAAGACTCCATCTTGACCAAA
ATCCCTACTACAAAAAAGATAAAAAACTGAGAATGTTCTGTATAGTCCATGTAAAACGATTAAGCAAAGAAGTTCTTAAA
CGCCATTCACGAGCATTAAGAATGTCAAGAGAGTATCTGGAACAGAAAGCACTGAAAAGTCTCGTTAATCTGGATAAACT
TGAAAAAAAACGTAAGAAAAATACTAAAAAAGATTCCAATTCATCGACGGATGATGACTCGTCCTCAAAAATTTCGAAAA
ATGCAAATAAACGAAAAGGAAAAGTAAAGGATAAACAAGAATCTTTGATGGATCATTTGAAAAGAATAGAAAACGATGAT
CTGCCCATGTCTAATGAAGCTCTGATATCAGAAGCAGATAAAATCGCGAAAGAGAATCTATTAAATTCCTCTGATTCAAA
CGAAAAAGAAATAGTAATAGACAGCGATGACAGCGTAAACAAAGATAATAAAGATGAAGAAACAGAAAAGAAGAAAACAA
AATATCAAAAGGAGTCTGAAGAGAAAACTTCAAAACAAGGCAAGAAAGAAAATAGCGATTGGAGGCGAGATAAATTATTG
ACAATGAAATTGTCCGACACCGATTCTGAGATCGAACAAAAAAAATGGGAGAAGAAACAAGAAAAAATGGAAAATGAATC
GAAAAAAAATAATAGCGATTCAGATGACGAAGAAAAATCCTTAAAAACTAACAAGAAGAAAAAGAAAACTAGGCGAAGAA
TCATAGATTCGGATTCAGATGTAAAAATAACGGATTGCAGTTCAGATTCTGAGTTCAAAGTTTCAAGTGCCAAAGAAAAT
TCATCCGACTCAGATAATACGAAGAAAGAAAAAGAGAAACGACGGAAGAGGCGCAAACGTGATAGCAATTCATCAGATAC
AGATTCTTCAGAAAAAAAGTCAAAACCGAAAAGAAAACGCATCAAGAAAATGGCATCTGATAGTGATAGCAGTGACGCAG
AAATAAAAAATTCGCAAGGATCCACGCCCGGTAAAAGCGGTCGAAAAAATATACGAAAAGTTCTGAAGGATAAGCAAGTA
GCGGAGGATACAAAACTAGCTGCTAAGGAAGAGGAGGAGAGACTGAAACGTATCGCTGAACGCCAAGCTGTGTACAATGA
AATGTATGAGATAAGACTCGCTGGCGAAGAGAAAGTAGATAAGCTCGTTTTAGACTTTGATACAGAGACGAAGAAAGAAC
TCGTCACCGTGCATGAAGAATTGGTAAAGCGTCTAAAACCGCATCAAGCGCAAGGCATTAAGTTTATGTGGGATGCTTGC
TTTGAATCTCTAGAAAGAACGAAGACTACATCTGGATCCGGATGTATAATCGCACATTGTATGGGTTTGGGCAAAACATT
GCAAGTAGTAACTCTAACATATACGCTTCTTACTCATGAAGAAACGGGTGTTAAGACAGTACTGATAGTTTGTCCGTTGA
GCACAGTACTCAATTGGCTAAATGAGTACAATACGTGGCTAAAAGATTTAGATGATGATATTCACGTATATGAATTAACA
AAATTTAGGAAGAATTTTGAGAGAAAGTGTCAGCTGCAGAGGTGGCAAAAGACTGGCGGTGTGCTGATTATTGGCTATGA
AATGTTTCGTAATCTTACGGGTTCGAGTAGAAATATTCGGAAAGGTATGAAAGAAGTGATATTGGAATGCTTAGTTAATC
CAGGTGCCGATCTTGTTGTTTGTGATGAAGGCCATTTATTGAAAAACGAAGACACTGCGTTAAGTAAATGTATGAGAAGC
GTAAAAACTATGAGACGGATAGTACTTACTGGAACACCACTGCAAAATAATTTAATAGAATATCACTGTATGGTGCAATT
TGTAAAGCCCAATTTGCTAGGTACAAAGAAAGAATTCTTAAACAGATTTGTAAATCCGATAACAAATGGCCAATTTGATG
ATTCTACCGCTTATGACGTTAAATTGATGAAAAAACGTGCACATGTGTTGCACAAAATGTTAGAGGGTAGTGTACAGAGA
TTCGATTACTCTGTGCTTACACCGTTCTTACCACCTAAACAGGAATACGTTATTTTTGTCAGATTAACAAAGACGCAAAT
TGAAATGTATCAATATTATCTAGAAAATCTTGCCAGACGCCAAGGAGGTCAAGGAGGAACTCTTTTCGCAGATTTTCAAG
CATTACAAAGAATCTGGACGCATCCTGTAGTCTTACGTCTAAACGCAGAGAAAATAGAAAAAGCAAATGAGAAGAAGTTA
CTTACCGAGTCAGAGGGTTCATTAAAAGATTTCATTAATGACGACACTACCGATGTTGACAGTGATAGTTCAAATAATTC
CAGTAGTGATAGTGACGTTCAAGCTGTCGATGAAGAAAATACAAATGTTTCAAAACGTAGGACAAGAAATAATCCTGGTG
AATCAGAAGAATCAGAGGAAGAGGTTAAAAAAGAAGAAAAAGAAGAATGGTGGTCGCAGTTTGTACAATCTGAACATTTT
GAAGATATTCGAGTGTCCGCTAAATTATTACTACTTTTTGGAATTCTAAAAGAGAGTGAACAGATCGGTGATAAAGTGCT
CGTATTTTCGCAATCTCTATATTCTCTCACTTTAATTGAGGAATTTTTAAAAAGAATAGACGACCAGACTCAAGAAGGTA
CAACCAATGACGCCCTAGATAATCATACCGGAAATTGGCAGTTAGGTCTCGATTATTTTCGATTGGACGGTCAAACTTCA
GCCGAAAATCGAAGTATATGGTGTAAAATATTTAACAAACCTACCAATACGAGGGCGAGATTGTTCCTTATATCCACGCG
CGCCGGAGGATTGGGAATAAACTTAACTGCGGCAAATCGAGTGATTATATTCGACGCTAGTTGGAATCCCTCTCATGACG
TGCAAAGCATATTTCGGATATATAGATTTGGGCAAAAGAAACCGTGTTATGTATATCGGTTTTTGGCGGCGGGAACAATG
GAGGAAAAGATTTATAATCGCCAAGTTACAAAACTCTCGCTCTCGTGCCGAGTCGTGGATGAACAACAGATTGAACGACA
TTATAGTAATCACAATCTAAACGAGTTGTATACGTTTGAGCCGTATAGCGATGAGGAAAAACCCACGTTAAATTTACCTA
AAGATAGATTGTTAGCAGAGATATTTTTGAAGTACAAGGATTTGGTAGAAAATTACCACGAGCATGATTCTCTACTGGAG
AATAAGGCTGAAGAGGAATTAGATGAGGAAGAACGCAAACAGGCCTGGTTGGAATATGAAGAGGAGAAGAAGGGAAGACC
ATTAATAAATCCGATAAATACAGCTTATCAAAATAACATGCTCCTACAACAGCAGTACATGATGAATCTTGTACAGTCTA
ACATGGTACCTCAAAATATGTCTTTGCAAAACGAGTATGAAAATCTTCAAAATCTTATTCGTAAAGACTATCCTAATGCA
ACGCCGGAACAACAAAAACTGATAGCTAATCGAGCTTTAATGGAAATGTATACTTACTGGGAGAAGCAAGCCGCAGTGTA
CAATAAACAATCTGTACAACCAATACGACATCCAGCAGTTATGTCGAATTTTCAAAGACCGCAAACTCCGAATTTTCAAC
AAAGACCACAAGTTCTAAACAACAGCAATATACATCAACAAAATTCACAGCTTCAGTTTCTTTTGGGGCAATCGACAAAT
TATGCGAACAAACCTGTGCAGTCGAATAGTGCACAAATAGGAGAGGTAGTTCCAAACCTATTTACATATCAAAATGCTCC
AGCTCCATCTGCTGTATCTAATAATGCAGGTGGAAACATGGACCAAGATGTAATAGAGGTCCCCACTGTAAGTAATACAG
CTGTAACACGACAGAGCGGGATGAATAGCGCACAAGTAGCTGCACAACCAATTGATAACAGTAAAATTCAGGAGGAGTAA

PEP:
>PB18428-PA
MGGNSRRGEFLTTILHPDHAEDIRVIKDTDITCTSCGDELNVDTKQIFSHPLIGILQCETCWNHIKKIEVKFYEDKTETC
YICGNSKKLYVCSIEDCYSAFCKGCIKRNVSLSLLDAEKRDWKCFICNPKPIWNLRAICAVIMNSLCKKGNRRSKSEKHI
LPSQVQRIEKTKEIQKVLQTICDKEDDDNDNPRNYVSIFMRKADKNRQERISEEDLTDSNSEDSLLSSKDNKKGKSKDKK
SRSARSGSIPRRSRLKEKIGSRKNQISSDDDSTDTLMNKITRSNCDCVHLSDNESDEYDATSKISKRISKNTRQQKEKAN
TKSKDMKKRCDSTSESEDEVKYKTRSTKRSTNRATSHSSIDEPKHNELSKKRLSISRIPEDDSDNSSSNSSSKEFQKIKL
QKVNRDKYSKRQLADLEIDHTKSPCEKNSANDKCEEDGKQSKNFNDVKKILKECKQICSNFLIHIETIEQLYSKQNEEQL
ILKSTEKINKLKTVIEKKQTDLITCYRSWSKNRKKSGTKKSSKVVSNNEESLQEHEKCISNDNQDVNKDVSECDSEEIFS
ADETKSPQKTQVTRQVDASKKKNINGINIDDEDRPKDNDENSVENNLASSPVLNPCKKKKISTEQSNKKHLFSECDKSNN
EEQLTDANTNTNDKQLNLNTDIHNNEIEIEDSPLRHGSKEMTLENERDKSYEKDILDESIDMFDVSFDVPENVEENRTEK
ETDVETNHDKRKYTSIDENLDTCQNSLQDEVSHKRKSKSLSFHNNEEERDSLDQNTVAPVFATNEEVQDNSKTSQKTNVD
DNESLDDAEALAKKALLETDSDLSPIGNITEQIEDPTTNDINLTKKNNDAEDNDFDVNSVSTIIFSALENKTNENIEKDV
VDEIETEITKKSIDKLDKKSHQELNSSDEDAKAEKAAKKALLESNSDDSTVLSTESGKVIDKKSETDSSEKNAKAKLALL
ASSNSESSTSESISSEKTSVSMSTKNIKHNHESESDEESIISKLKRRRLHLDQNPYYKKDKKLRMFCIVHVKRLSKEVLK
RHSRALRMSREYLEQKALKSLVNLDKLEKKRKKNTKKDSNSSTDDDSSSKISKNANKRKGKVKDKQESLMDHLKRIENDD
LPMSNEALISEADKIAKENLLNSSDSNEKEIVIDSDDSVNKDNKDEETEKKKTKYQKESEEKTSKQGKKENSDWRRDKLL
TMKLSDTDSEIEQKKWEKKQEKMENESKKNNSDSDDEEKSLKTNKKKKKTRRRIIDSDSDVKITDCSSDSEFKVSSAKEN
SSDSDNTKKEKEKRRKRRKRDSNSSDTDSSEKKSKPKRKRIKKMASDSDSSDAEIKNSQGSTPGKSGRKNIRKVLKDKQV
AEDTKLAAKEEEERLKRIAERQAVYNEMYEIRLAGEEKVDKLVLDFDTETKKELVTVHEELVKRLKPHQAQGIKFMWDAC
FESLERTKTTSGSGCIIAHCMGLGKTLQVVTLTYTLLTHEETGVKTVLIVCPLSTVLNWLNEYNTWLKDLDDDIHVYELT
KFRKNFERKCQLQRWQKTGGVLIIGYEMFRNLTGSSRNIRKGMKEVILECLVNPGADLVVCDEGHLLKNEDTALSKCMRS
VKTMRRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTKKEFLNRFVNPITNGQFDDSTAYDVKLMKKRAHVLHKMLEGSVQR
FDYSVLTPFLPPKQEYVIFVRLTKTQIEMYQYYLENLARRQGGQGGTLFADFQALQRIWTHPVVLRLNAEKIEKANEKKL
LTESEGSLKDFINDDTTDVDSDSSNNSSSDSDVQAVDEENTNVSKRRTRNNPGESEESEEEVKKEEKEEWWSQFVQSEHF
EDIRVSAKLLLLFGILKESEQIGDKVLVFSQSLYSLTLIEEFLKRIDDQTQEGTTNDALDNHTGNWQLGLDYFRLDGQTS
AENRSIWCKIFNKPTNTRARLFLISTRAGGLGINLTAANRVIIFDASWNPSHDVQSIFRIYRFGQKKPCYVYRFLAAGTM
EEKIYNRQVTKLSLSCRVVDEQQIERHYSNHNLNELYTFEPYSDEEKPTLNLPKDRLLAEIFLKYKDLVENYHEHDSLLE
NKAEEELDEEERKQAWLEYEEEKKGRPLINPINTAYQNNMLLQQQYMMNLVQSNMVPQNMSLQNEYENLQNLIRKDYPNA
TPEQQKLIANRALMEMYTYWEKQAAVYNKQSVQPIRHPAVMSNFQRPQTPNFQQRPQVLNNSNIHQQNSQLQFLLGQSTN
YANKPVQSNSAQIGEVVPNLFTYQNAPAPSAVSNNAGGNMDQDVIEVPTVSNTAVTRQSGMNSAQVAAQPIDNSKIQEE
Swiss-ProtE1A-binding protein p400
KEGG     K10779     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00271  Helicase_C; Helicase conserved C-terminal domain     
SMARTSM00487     
ProSiteProfilesPS51192  HELICASE_ATP_BIND_1; Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.     
CoilsCoil

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