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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB23470
Positionscf7180000350342:2531405..2536151[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB23470
sequence mRNA:
>PB23470-RA
CTACACATATTTGACATTGCGCCACAATGGGCGCTATCGGATCATTTTATGCGGTGGATCAATGTTCAAACATTGGTAGC
ACATAATAACGAGCAAGACATAGATGACTCGTATTATAAGACGAAAGATACCACGGAAGCTATTAATTTAAACTTGATAT
ATCCTATAAAGTTATCATCAACAGTACGACACAATGATAGGATAGTGAATTCTAATGTACTGACTAGTACAGTTAATGAA
TCACTATCCGAACAAACGAAAACCCTGCAGAAGGAACAAAAGAATAGGCTGGATAACTGCCAGAAGGATTACGGTGAGGG
AACAAAATCTAGCTTGCTAAATACCACTAAAACGACGGATTCGTTTGTGAAGAATACAAGCAGAATTTTATCTGAATCAC
AAAAAGAAATTTATCACGATACAAATATTAAATTGTTGAGTTGTTTGTCAAAACATTCAATTGACACGCAAAATATTGCC
GAACTAAAAGTTACGTCGGACAATATTGAGCACAATAAAGAAGCTTGTGATCCCGATTGCACCACTTCTGTAGCAGATAA
CGAGCCACTTAATTTAGTAATAAATTCGGAAGAAAGTATACGCAGCCATACCTACAGTAAGACAAGGAATCGACTCTGCA
ATTATCCGCATTCGTTAAGTGTCGATAAGGAGACACTTTCAGTAGACGGTGCCATTTTAAGACAATTAGATCATTCCTCC
AATGTACAGAGTTTTTGTAACGCAAAGTACAAGAAAGTAGATTATGGCTTATTGAAGCTTTCTGATTTAAATGAGTTGTC
ATGTAATTCGGACAAAGGTAAAGAATTGTTTAAAACCATCGGCAAACTGCATGCCAGTAGTAGTGAAGTAAATGGAAAGA
TCGTAACGAATGGTGATTTGAAGCAAGAGAGTGAGCAAATTTTGGATAAATACGTCACGCATGTATTACCATCACGCTTA
AGTGAGAATAAAGCAAAAACATCGGCTTGGATACAGTTACAATCGAATGTCAAATGTAATAACATCAAAAAAGAGTATTG
CAGTGAGGAAGGAAAACATAAATCAGAAAGTACCGATCTAGTGACCGTCTGCAACTCAAGATTAAACAATTGGGCGTGTT
TCGAAATGTCAGGACAGTATCCAGGTCATAGCCGACCACCGGTTGGCACACCTCCACCACAAACTGTCTGGAATCATCTC
ACTATGACGCAGGGTCAAGCTCTCAATATCCACCCGACGGCATTATCCGGTCCCGCTTTAAGTCCAGCCGGATTCTACAC
GCATCCATCCATGGCACGGACATCCCATCTGCCGTCTCAACTCACTCCGCAACTCGCTCATACGCAAGCACCACCGACGT
GGCATACACCCACGGTCCCTTCAAAAAGCGTTACGCCGGCAAACACGCCGGGTAATCCTTTGTTCAGTTTACAAATGCTG
GTAGACAATCGGCAAAATCAAAATCAGTACAGAAACTCACCTGGCTCCCAAAGTACTTTAGATCTCTCGTCTACGTCAGA
GATTATTCCGGAGAATTATTCTCGAATACCTCAGGATATTCCCATCAGTTTAACCGCGAGAAATGTAGATAAGGGCAGTC
GAAACGGGAACATAATCTCACCGCCGATACCGCTCAACGGGGAGACCTCGTCGGACAGTGGAATCAGCTCATCCGTACCG
ACGCCGAACCCTGTTACTGAACCAGTTTCACTATCGACGAAAGAGGTCACCACTCCTAAGATATCGGTGAAAAACTTTGA
CAATCTAAAAGGAGTCGCGAATCTTCATGATAAGATTAAGGAAATGAATGTAGATAATTTTACGCAGAAAGTGATAAATT
TGCCGCCTAGTGTAACGATAGAGAGGGTACTTGCGGATAAGAAAGAGCCTGAAGCTTCTGTGAAAACTAAGGATACATTA
AGTGTAATCGCGCAAATGCCAAGGAACTTACCTGTTATAGTCAATTTCTCTAAAACGGAGAAAGATGTTACGGATAGTCC
TAAAAGAGAATCTTCGTCTGAAAGAGATAGAAAGCACGAGGAGACGAGCGTGAGGTCACCTAAGAACTTGCCTAAAAGAG
GCAAAAAAGGTGTCGATTCTCTATTGGAAAAACTGGAAGGTGGAAATAAAAAGCTCGGGAGTGCCGAGAATATCGGTTCG
GTAATTGTAATGCCGGTGGAAGAAAGGGATACATCCAGCGTTAAAAGTATGTCGCCGGAGAGACAAAAATCGAAATCACC
AAATCGGGAAGATGAAGTTGTGTCACCAGCTTTTAGCAATGACGACTCGAATGATAACACCAAACAACGCAGAAAACGAA
AATTAGAAAAACCTGTGAGATTAAGCAAGGACTCGAAAACGGAAGTCGAGGACATGGAACTCGAGCCCACGGAACCCACG
GAACCAAGGACTATCGATCCATTATTGGAAGAAACGACGAGTTCCACAGCTGACGTCAAGATAGAAGAGCAGATTGCCAA
AGAAGCGGATCCGGAGGTGAAAAATGAAGAATCAAAAGCGGAACTCGCGAGCGCGCAAATTCAAGACGATAACGCCACCG
TGAAATTCGAAGGTCTCGACAATAATATTCTGCCAATGACCGATTCTCAAAACGTTCAGAGTAATCCCATCGACGTTTCA
TCCACAGTAGATACGAAACTATCGGGGAGGAAAGGTAAAAAGGGCAAAATGCAGGGTAGCAAAAGAAAGATCTCCAGGTC
GACAGAAAATATCTTTGGCACAACGGATGATTCTCCACTGAAAGAGACAAAGAAGAGGCGGACGTCCAAAGGCTCGAAGA
AACAGGATCAAGCTTCGAAGAAAACGAAGAAGAACATCAAAATCGATGGCCTGAGGGAGATGGCTTATGATTCTGGTTCG
AATGCGAGTTCGATCAGGTCACGAGGGCCAGTGGTTCACGTGGAAGGGCCCAGGGATAGTCCATTGAGTATCCAAGTGGT
TAACGCACCACGAGAGGAAGAGGAGGAGAAGAGCAAAGAGAAACGGAAAAGCGTTGGCAATGGAAACGGAGGCCGAAGCA
AGAGGCTCAGTCATCAAAACGATTTGGATTACAGGGGTAAAGTCAGTAGAGCCGGTCTCTTTAGTTCAACCTTGTCTTCG
CGATACGATGCGCACACCACGGACTCAACCTGGGTCTGCGTATTTTGCAAACAAGGTCCCCATTCCGTTATTCCCGGAGA
TCCATCCAGGCCACATCCGAATTTGGCCGGACCGCATATCGCAACTGGAACGTACACGGTTCCAGCTGGCGTGTTAAGTG
ACTTATTTGGACCATACTTGATCGGCAAAGAGCGATTGGAGGATGGTATTTTATCGGCTGACGAGCAAGAAATCACGACG
GAACAGAAGAAAGGCGGCAAGAATAAGAGGAGCTTGAGGTACGCGGGTCTGGCAGATCAGTTCTCTGCGAAGATGGGAAA
GAAGAAGCGGAATTCCGTGGAAAGTAATACAAACGCCATTTTTACGGGTATGACTCTGCATCCTGGCGGGGAGGAACAAC
GGTGGGAGGTATGGCTCCACGAGCAGTGCGCAGTATGGGCGGCTGGGGTATACATGGCGGGTGGCAGAGTAACAGGACTT
CAAGAAGCGGTGTGGGATGCTGCCAAATCAGTATGCGACTCTTGTGGTCTGACAGGCGCGAATATCGGTTGCGTGAAACG
TGGCTGTAAGGCTGTCTCGCATTATCCGTGCGCACTCACGAAAGGTTGGCACCTCGACACAAATCAGTACATACCTAAGT
GTAATCTTCATCGAGTTACGTGA
PEP:
>PB23470-PA
MRWINVQTLVAHNNEQDIDDSYYKTKDTTEAINLNLIYPIKLSSTVRHNDRIVNSNVLTSTVNESLSEQTKTLQKEQKNR
LDNCQKDYGEGTKSSLLNTTKTTDSFVKNTSRILSESQKEIYHDTNIKLLSCLSKHSIDTQNIAELKVTSDNIEHNKEAC
DPDCTTSVADNEPLNLVINSEESIRSHTYSKTRNRLCNYPHSLSVDKETLSVDGAILRQLDHSSNVQSFCNAKYKKVDYG
LLKLSDLNELSCNSDKGKELFKTIGKLHASSSEVNGKIVTNGDLKQESEQILDKYVTHVLPSRLSENKAKTSAWIQLQSN
VKCNNIKKEYCSEEGKHKSESTDLVTVCNSRLNNWACFEMSGQYPGHSRPPVGTPPPQTVWNHLTMTQGQALNIHPTALS
GPALSPAGFYTHPSMARTSHLPSQLTPQLAHTQAPPTWHTPTVPSKSVTPANTPGNPLFSLQMLVDNRQNQNQYRNSPGS
QSTLDLSSTSEIIPENYSRIPQDIPISLTARNVDKGSRNGNIISPPIPLNGETSSDSGISSSVPTPNPVTEPVSLSTKEV
TTPKISVKNFDNLKGVANLHDKIKEMNVDNFTQKVINLPPSVTIERVLADKKEPEASVKTKDTLSVIAQMPRNLPVIVNF
SKTEKDVTDSPKRESSSERDRKHEETSVRSPKNLPKRGKKGVDSLLEKLEGGNKKLGSAENIGSVIVMPVEERDTSSVKS
MSPERQKSKSPNREDEVVSPAFSNDDSNDNTKQRRKRKLEKPVRLSKDSKTEVEDMELEPTEPTEPRTIDPLLEETTSST
ADVKIEEQIAKEADPEVKNEESKAELASAQIQDDNATVKFEGLDNNILPMTDSQNVQSNPIDVSSTVDTKLSGRKGKKGK
MQGSKRKISRSTENIFGTTDDSPLKETKKRRTSKGSKKQDQASKKTKKNIKIDGLREMAYDSGSNASSIRSRGPVVHVEG
PRDSPLSIQVVNAPREEEEEKSKEKRKSVGNGNGGRSKRLSHQNDLDYRGKVSRAGLFSSTLSSRYDAHTTDSTWVCVFC
KQGPHSVIPGDPSRPHPNLAGPHIATGTYTVPAGVLSDLFGPYLIGKERLEDGILSADEQEITTEQKKGGKNKRSLRYAG
LADQFSAKMGKKKRNSVESNTNAIFTGMTLHPGGEEQRWEVWLHEQCAVWAAGVYMAGGRVTGLQEAVWDAAKSVCDSCG
LTGANIGCVKRGCKAVSHYPCALTKGWHLDTNQYIPKCNLHRVT
Swiss-ProtPentatricopeptide repeat-containing protein At4g21880, mitochondrial
PfamPF13771  zf-HC5HC2H; PHD-like zinc-binding domain     

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