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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB16056
Positionscf7180000350188:545545..549185[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB16056
sequence mRNA: 
>PB16056-RA
CACTTTCAAAGGGAATGTGATGGAACGTGACTCGTCGTACATTCACATGGTACTTGCGGCAGAACGACACGACGATCCTA
AAGTATTCCAAAACGCTGACGGAGGAAATAACGCGCGATGAATACGTTATTTCATACGAAAACAATGATCGCCGGTCACG
GTGGAGTTATTACTCGACGATACTCCCCATTTAAATTATGGTACAACACCAATCATATAATGGGTGGCATAGCTCTAGTT
TATACAGATTTGAGAGATCCGAGAAAATTATTGTTAGAGCCGACAGTGTCACCGGCATATATTAATAATAAAAGTATGGC
ATGTCTACAAATTCGTACATTTTATATAACTCCAAATTGGAAGAGTCAAGAGCCATCATCTAAGATTGAAGAAACAGTTA
AGAATATTAAAGAGGAGAAAGAACTTAAAGATAAGATGGTAGAATATGTTTCAAAAGATAGTGACCAAGCAAAAAAAGCT
GTTGCTAAAGTTTCGATATGGCAAAAAATCAAAAGCGAAATATTGCATTATTATCATGGATTCCGCTTGTTAGGACTTGA
TATGAAAGTATCAGCAAAGTTAATATGGAGAATTTTGCATGGAAAGGAGCTTAGTAGAAGGGAGCATCGTTTGTTAATAA
AAACGACTGGAGATATGTTCAGATTGATTCCTTTTTCTGTTTTTATTATTGTTCCATTTATGGAATTTTTATTACCAGTG
GCAATTAAGTTATTCCCTGGCATGTTACCTTCTACTTTCCAAACCGCAACTGAAAAGGAAGATAAACTTAAGCAGGCTTT
GAAAGTTAAGATAGAAATGGCAAAATTTTTACAAAAAACATTGGACGAAATGGCATTGCAATCATCAGATCACAAATCTG
AGAAAGCTAAAGAATTTGCAGAATTTTTTTATAAAGTACGAACAACCGGCACTGTTGCAACTAATGAAGAAATCATGAAG
TTTAGCAAAGTTTTTGAAGATGAAATTACTTTAGACTCTCTTTCACGACCACAACTAATTGCGTTATGTCGTGTGTTAGA
TGTACAAACTCTTGGGACTACCAATTTCTTACGGTTTCTACTTAGAATGAGACTGAGAAGTCTTACTGCAGATGACAAAC
TAATTGAAAAAGAAGGAGTTGATACTCTGACAAGAAACGAATTGCAACAAGCTTGTAGAGCACGTGGTATGCGTGCTTAT
GGATTGCCGGAGAGTAGGTTGAGGGAACAATTGTCGCAGTGGTTAGATTTGAGTTTAAATAAAAAAGTACCGCCTTCCTT
ACTACTGCTCTCACGAGCGCTTATGATACCAGAGACGATATCTATGCCAGATAAATTAAAGGCGACTATTTCGGCTTTAC
CTGATGCGGTTGTGGCTCGTACAAAAGGTGCTATTGGAGAGAAAGAGGGTAAAGTGGATCATAGAACCAATATCGAAATT
ATAAAAATGGAAGAACGCAAGATCGAAGAAGAGAGGAAAGAAAAGAAAGAAAGCGAACCAGAACCAACCGTTTTGGAATC
CAGTACTAAAGTTGATGAAATTACTACTACAGATGTCAAAGTTTTGGAACAAGCTCTGGATTCAATTGGCAAAGATAATA
AAAATATGGCTGTAGAAAAAGAGGAAATTAAGGAACTTAAAGAAGAAATGGCGGAATATCAAGAAGATATTAAGGAATTG
TATCAAATTAAAGCAGAAGCAAAAGGTCAAGCAGATATAGAAAATATTAAAGTATCAAAAGGTGCTAATAGACTATTCAA
GAAGGTAAATAAAATGATTTCGAAAATGGATGCTGTTTTGTTGGAGCTCGAACAATCTGAGAAAAAAGTTAAACAAAGAA
TCGAATCATCGGCTCTTGAGAAACAGGATACTAAAGACGTTGAAGAATTAGTTAAAATAGACGAGTTGATTGCAGCCATT
AAGCAAATCCAAAGTGTGCCCGATCAACATCGTTTAAAACGCATAGCAGAAATTTTAGGAAAAATTGATGACGATCATGA
TGGTGCAATAAAAATAGAAGATGTCCTAAAAGTTGTAGAATTAATAGGTAAGGAAGATGTTAAATTAAGCAAAGAACAAA
TGGATGAATTGATAGATTTAATGGATAAAGAAGAAATATTAGAAGTAGAAGAACAAATACAAAAATCGTTGGAAAAGGAT
TCCAAGACATCCGAGGCGGAAGAGAATATGAAAGCTACAAATAAATCTACAGTTCCAGCTACTCCGGTAACAACTGAGTC
AGGATTTGGGAAAGAGGAATTAGTAGATGATGCCATCAGAGAATCGAACAAATCTTATGCAAGTCCACCTATCGAAGAAG
ATAAGCAGAAATCAGCTGCCGTTCTTAAAAGTAATTCCAAATCCGACGAGGTTAAAAATCCTTCAATTACATCAGGTGTT
TCAACAGTGAAAAAGGCAGAAGGTTCTAAACAACTGTGA
PEP: 
>PB16056-PA
MNTLFHTKTMIAGHGGVITRRYSPFKLWYNTNHIMGGIALVYTDLRDPRKLLLEPTVSPAYINNKSMACLQIRTFYITPN
WKSQEPSSKIEETVKNIKEEKELKDKMVEYVSKDSDQAKKAVAKVSIWQKIKSEILHYYHGFRLLGLDMKVSAKLIWRIL
HGKELSRREHRLLIKTTGDMFRLIPFSVFIIVPFMEFLLPVAIKLFPGMLPSTFQTATEKEDKLKQALKVKIEMAKFLQK
TLDEMALQSSDHKSEKAKEFAEFFYKVRTTGTVATNEEIMKFSKVFEDEITLDSLSRPQLIALCRVLDVQTLGTTNFLRF
LLRMRLRSLTADDKLIEKEGVDTLTRNELQQACRARGMRAYGLPESRLREQLSQWLDLSLNKKVPPSLLLLSRALMIPET
ISMPDKLKATISALPDAVVARTKGAIGEKEGKVDHRTNIEIIKMEERKIEEERKEKKESEPEPTVLESSTKVDEITTTDV
KVLEQALDSIGKDNKNMAVEKEEIKELKEEMAEYQEDIKELYQIKAEAKGQADIENIKVSKGANRLFKKVNKMISKMDAV
LLELEQSEKKVKQRIESSALEKQDTKDVEELVKIDELIAAIKQIQSVPDQHRLKRIAEILGKIDDDHDGAIKIEDVLKVV
ELIGKEDVKLSKEQMDELIDLMDKEEILEVEEQIQKSLEKDSKTSEAEENMKATNKSTVPATPVTTESGFGKEELVDDAI
RESNKSYASPPIEEDKQKSAAVLKSNSKSDEVKNPSITSGVSTVKKAEGSKQL
Swiss-ProtExtracellular matrix-binding protein ebh
KEGG     K17800     
SUPERFAMILYSSF47473  EF-hand superfamily     
Gene3DG3DSA:1.10.238.10     
PfamPF07766  LETM1; LETM1-like protein     
ProSiteProfilesPS50222  EF_HAND_2; EF-hand calcium-binding domain profile.     
CoilsCoil

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