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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB22994
Positionscf7180000350335:2205633..2213393[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB22994
sequence mRNA:
>PB22994-RA
ATGCTTATGCCTACATTAATATCAACTGAACAAGAATTATCTAAACCAGTAGATGTAGCACAAATGGCACAAACAAACGT
CTCGAAAGAAACAAATAAGAAATCTTTGAAGAATGATAAAGAAGCGATTCAAATTATTCGAGGCAATCGTGTGATTAAAT
TACCACCTATTGAAGCACCTGCCACTAGAAGTAAACGATTGCAAGCCAAAACAGAGATATCGCAAACAAATTCCGAGCCG
ATAAAGAAAATAGAAAAGTTAGCTCAGATACCAGTTCAGCAACTACAAGATAGCAAGAACGAGTTCAAATCAGGACAAGT
AATAAATGAAGAAGACGATGAAGATGATGACGATGATGAAGAAGACAATTCAGATTCAGAAGATGATCCAGACCGATTAT
GGTGTATATGCAAACGTCCACATAATAATCGATTTATGATATGTTGTGATGTCTGTGAAGATTGGTTCCATGGAAAATGT
GTACATGTCAGCAAAGCTATGGGTCAACAAATGGAAGAAAAAGGTATAGAATGGGTTTGTCCAAATTGTTTAAAAAAGAA
AGCCGAAGAAGAGAAAACAAAGTTGAATTCGCAATCGCTCTCTGGAAAACAAAAACAAAAATTGAATCACGAAAATCCGG
TATCGCAAATTGTACTATTGAAAGAAATATCTCCATCAAGTTCTTCTACCGACCAAAGTACTGCAGCTTCTAGTACAATG
CAATGTGTTGTTTGTAAGAAAGAAGCCAGAAATTCTAGCATTTATTGTTCAGATGCTTGTATTCTTGCACATGCTCAAGA
AACTTTAACTAAAGATAAACCTGTACCATCAGGATCTAATATAAAAACTACAAAATCACCTGTGACAGAAACTGCAAAGG
CAAAACCTGAGACTAGAGTAGTAGTTTTTGATAAAAAAACTGGCAAAGTTCTTACCGGTGCGGATGCTCCTTTGAGATCC
AATCTGCGAACGTGGTTGAAGGAGAATCCAACTTTTGAAATTGTGGAAGCTAATAATATCAATACACTTCAAATAGGCGG
AAAACTCGTCACGCAGATCCAAACATCAGGAAAAACTGTATGTATCTTAATGTCACAAAAAAAGAGATTTAGGATTTTCA
CAAATGCAAAATATGCCAAAGATGATCTACACGAAGATAGCTGGATCAAAACAAACTGTTTTAGCACCAAACAAAAAATT
ACAATAATTCCTGCTACACAACAACAAGCAAGCGTCTCATCCAGTAATAAATCGGCACAGCTGAAACAAACGATAATTAG
TACAACACCGGGAAAGAGCCCTGTAATATTGAAGACATCGAAGAACGTCACACAAGCGCAATTGAAAACTCAAACAGCAG
GTTCACCGAAGCAAATACCAATTAAGAAGCAAGAGGCAAAACCATCACCGTCTCAATCAAAGCAACAGACTAAAATAACA
CCGGTTAAGAAGCCAGAAACTGAACCTATTCGATTAAATATCCGAAAAACGCTAACAGAATTACTGTCCAGCCGTATAAA
AGAAACCGAAGATTTAAAGTTAACCGACGAGGAGATTGCTGATTTAGCTTTTAATATAGAACTTGAAATGTACAAATATT
TCAAGGATACCGGTTCTAAATACAAAGCGAAGTACAGAAGTCTCGTGTTTAACATAAAGGATACCAAGAACTTGACGTTG
TTCAGAAAGATCGCGGACCGTTCATTAACGCCAGATGCAGTGGTACGATTAAGCCCGGATGAGATGGCCAGTCAAGAATT
AGCCGAATGGCGTGAGAAAGAGACGAAACATCAACTTGAAATGATAAAGAAAAATGAATTGGATCTGATGGCTCAGGCTA
AGTCGATTGTCGTTAAGACTCACAAAGGTGAACAGATAATCGAGAACGATGGTGGAATCGACCATGTTGATCCTAAAACG
CCAGTGCAAGATATCGTCTCCGCGTTAAATAATGGTGATAGTATAAGTTCTACAATTGACGATTTGGAAAAGGATAAGGA
TAAAGAAGACAGATTAAAGTCACGAATGGACGCAAAAAAATTAAAAAATACAGATGAACGAAGGAGAAAAGATAAGGAGA
GAGGAAGAGAGCACGATAGTGTAAAGTCCAAGAACAAGGATCGCGAGAGAAGTCATAGTCGACATCGGCATAGTCATGAT
CGGGATCGCAGTAAGACGCGAGACAAGAGTAAGGAACGGAAATCAAGCAAGAACAAAGAGAGCAGACGCAAAGACAGAGA
ACGAGAGAAGGATAAAGATCGGAATAAAGATCGAGATAAACAAAACAGAAAAGAGAGCAGAGAGAGAGATAGACAGAAAG
AAAAAGATAGACATAAGAATGACGGTCATTCAAGAAATCGTAGCGAAAGTAGAGAATCCAAAGACATCGATAAACGAGAG
GAAGAACGTAAAAAGGAAACCGAGAAGAAAAAGGAAACTTCGCCGTCACTTGTCGAAAAACCAATAGAAGATCGTCTCTG
GCGGCACATAGAAGACGAGGCAACGACAAATACCATTGACGGAAATGATTCTGATATATCTGATAGAGAACCCAGTTCTA
CCGTCACAATCAAGACGCCTGACATAAACGAAGAGCCTGAGAGAGACAAGGAACAAGTTACGGACAAAGAAACGTTGACA
AAAGGCAATTGGCAAACTGTCTGGCGTGGTTTTGTCAATATGGTTGACGTCGCTAAGTTCTTCATAACCGCACAGGAAGT
AAGCGGCAATGCCAAGGATCTTATGGACGATCTACCGGACACTGTTGACGTTGTTGGTAGGATTAGTCACGAGACTGTTT
GGGACTATATCTCGAAGATGAAGAGAAGTGGCTCGAAAGAGATTCTAGTCATCAGATTAACGGCCGCAAATGACGAAGAG
AAGATTCCTTACATAACTTTGTACAGTTATCTGAACAGCAGAAGCCGTCTGGGCGTTGTGGGTAATGTCTCTAAAAATAT
TAAGGACTTTTATATAATGCCATTTTCAAGTCAAAGCACGATACCACCTGTCCTAATGCCACTTACTGGACCCGGATTTG
AGGAACATCGGCCGCATCTGCTTCTCGGCATTATAGTTCGCAATAAGAAGAAACGATTGTCGACCATTTCGCCAGTGGTA
GCTTCTAAAATGTCTAAGAAGGAGTCTGACAGAAGTTATACTCCGCCATTGGTTAACGTTGCGAAGGAAAAAACTTCATC
ACCACCGCCGTCCTTGTCTCCTATGTTATACAAAGCAACTACGTTAGATTCAACGAAAGAGAAAACAGCAGCGGGTTTGG
GGCTAGATCCGCCCACTGATGATTGCGAAGAAGCTTACAGTCCATCAAATGCGCGGTCCTTTACGCCTCCGCCACCCATT
TCCAAATTTGCACAGCCTATCCTCGATAAAGTCTCTGATATTACTATACCTCCGAACTTACAGGAGATTCTAGCGAACGT
CAAGCGACAAGAATCTTCAAAAGTAGATCCTTATCTTCCATCTAAGCCTAGTGCATCGTTCTTACCCACGGCTGGCACAT
CGCTTTACCAGAACACGGAGAAATATTCGCCCTCGTCCTCTTCCAGGAGCAGTCAATCGGAGAGAGCATCACTGGAAGTT
CCTAAGGAGAGCAAAAGTACTTTAAGTACTTTGAGTGATTTAGATTTGATCAGAAAAGCTGAAGAAGAATTGGCTGCCGT
TGCTGCCGCAACGGCAGCGGCATCCGCAGTAACAGCACCTTTATCATCTTCATCCTCATCCTCATCGTCATCTTCGTCGT
CCTTGCCATCGTCGTCATCGTCTCTTGCGCCTTCTGGTACGAACCTCTTAACACCACCGTCCATTGCTCCTATAAGCGAC
GCACCAATCTCACCATCACTGCAAGTTCTATCGTCACTTTCTACAGAGACCGCGTTGGAAGCTAATAAATCATACAAGCC
GAGTCCTTCGGAGTCTTTCAAGAAGAATTTTACTCCCGAACAGCCAAAGCCACCTGGCCTCGAAGACGAAGATTTTCCCA
TTTTTCCGTCGACTCTACCGACAACAGATGTCTCCAAAGTGGCGACCGCATCTCATTCAAAAGTTTCATCCAAGAGTGGT
ATTGTACTGAACGTCAAGCGGAAATTAAACGATGACGGTAACTCGTCATCGCCCAGTAGATTACCGAGGACAAAATCGCG
CTGGGGTCAAAGACCATCCGAGTAG
PEP:
>PB22994-PA
MLMPTLISTEQELSKPVDVAQMAQTNVSKETNKKSLKNDKEAIQIIRGNRVIKLPPIEAPATRSKRLQAKTEISQTNSEP
IKKIEKLAQIPVQQLQDSKNEFKSGQVINEEDDEDDDDDEEDNSDSEDDPDRLWCICKRPHNNRFMICCDVCEDWFHGKC
VHVSKAMGQQMEEKGIEWVCPNCLKKKAEEEKTKLNSQSLSGKQKQKLNHENPVSQIVLLKEISPSSSSTDQSTAASSTM
QCVVCKKEARNSSIYCSDACILAHAQETLTKDKPVPSGSNIKTTKSPVTETAKAKPETRVVVFDKKTGKVLTGADAPLRS
NLRTWLKENPTFEIVEANNINTLQIGGKLVTQIQTSGKTVCILMSQKKRFRIFTNAKYAKDDLHEDSWIKTNCFSTKQKI
TIIPATQQQASVSSSNKSAQLKQTIISTTPGKSPVILKTSKNVTQAQLKTQTAGSPKQIPIKKQEAKPSPSQSKQQTKIT
PVKKPETEPIRLNIRKTLTELLSSRIKETEDLKLTDEEIADLAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTL
FRKIADRSLTPDAVVRLSPDEMASQELAEWREKETKHQLEMIKKNELDLMAQAKSIVVKTHKGEQIIENDGGIDHVDPKT
PVQDIVSALNNGDSISSTIDDLEKDKDKEDRLKSRMDAKKLKNTDERRRKDKERGREHDSVKSKNKDRERSHSRHRHSHD
RDRSKTRDKSKERKSSKNKESRRKDREREKDKDRNKDRDKQNRKESRERDRQKEKDRHKNDGHSRNRSESRESKDIDKRE
EERKKETEKKKETSPSLVEKPIEDRLWRHIEDEATTNTIDGNDSDISDREPSSTVTIKTPDINEEPERDKEQVTDKETLT
KGNWQTVWRGFVNMVDVAKFFITAQEVSGNAKDLMDDLPDTVDVVGRISHETVWDYISKMKRSGSKEILVIRLTAANDEE
KIPYITLYSYLNSRSRLGVVGNVSKNIKDFYIMPFSSQSTIPPVLMPLTGPGFEEHRPHLLLGIIVRNKKKRLSTISPVV
ASKMSKKESDRSYTPPLVNVAKEKTSSPPPSLSPMLYKATTLDSTKEKTAAGLGLDPPTDDCEEAYSPSNARSFTPPPPI
SKFAQPILDKVSDITIPPNLQEILANVKRQESSKVDPYLPSKPSASFLPTAGTSLYQNTEKYSPSSSSRSSQSERASLEV
PKESKSTLSTLSDLDLIRKAEEELAAVAAATAAASAVTAPLSSSSSSSSSSSSSLPSSSSSLAPSGTNLLTPPSIAPISD
APISPSLQVLSSLSTETALEANKSYKPSPSESFKKNFTPEQPKPPGLEDEDFPIFPSTLPTTDVSKVATASHSKVSSKSG
IVLNVKRKLNDDGNSSSPSRLPRTKSRWGQRPSE
Swiss-ProtPHD and RING finger domain-containing protein 1
SUPERFAMILYSSF46942  Elongation factor TFIIS domain 2 superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF07744  SPOC; SPOC domain     
SMARTSM00510     
ProSiteProfilesPS50016  ZF_PHD_2; Zinc finger PHD-type profile.     
CoilsCoil
ProSitePatternsPS01359  ZF_PHD_1; Zinc finger PHD-type signature.     

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