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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB27286
Positionscf7180000350340:550928..576869[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB27286
sequence mRNA: 
>PB27286-RA
ATGGAGGAGAATGCCAAAGTGTCAGATTCGGGATACTCCAATACTTGCAGCCAATCGCAACGCAGTAGCGGTAGCTCAAA
CTCAAACTCGAGGAGTAATCGTTCCGAAAGCAGTGGCTACTGTGGCAGACGTCCTTCGACCTTCGGATCCAGCAATGAGG
CGTTACCACAGCCGATTAGCAAGAAGAAGGATAAGGAGCATAGGAAGAAGAAGTCGAAAACGGTGACGGCGTGTAACGCT
GCCGAAGCGGAAGTTGACCCAAAAACGGTGAACCCGCTGCCGGAAGTCGCATCATATAACGCCGTTACGCCAGCGAACGT
CGTACTTGACAAGAAACCAGGATTTTGTGCAGTGATTTCGATGCACGATGGTCTTGTGCTGTACACAACCCCGACGATAT
GCACCGCCCTCGGTTATCTCAAAGACGCTTGGATTGGCCGGTCCTTCATCGATTATGTACACCCGAAGGATAAAACCACC
TTGGCCGATCAGATCACCAGTGGCATCGCCTCGCCGCAAGAGGAGCGGTCCAAAGGCATCAATGGCAGAAGGGCGAGTCT
GTTCTGCGGTCTGCAAAAGTTTACCAGGTGCAACGTGCCGAATGGACATCGTGCGAACGCCAGATCGAACTTGTACCTGC
CATTCCACCTGACCCTGTCGTTCCGGGATCGAACGGCCGAGCAACAGCCCAGCAACCGAGCTATGTTCCTCGTAGTTACC
GCTCAACCCGTCCATTCCGCATACAAAGGTAGCAATTCCAATACTTCGGCTATCTACCACAGGATATGGTTGGCCGTTCG
TTGTTTGACTTCTATCATCCCGAGGATCTACCTTTCATCAAAGACATCTATGAGACTGCTCGAAGGCTCCTCCTTCAGGT
CGAAGCCGTACAGATTCGCCGTGCAGAACGGGGGCTGCGTCGTCCTCGAGACCGAGTGGTCGTCCTTTATCAATCCCTGG
ACGAAAAAACTAGAGTTTGTCGTAGGTCAGCATCGGGTGCTCAAGGGGCCGGTGGACCCGGACATCTTCCGCGTGCCGCG
CGACACCGAGTGCGGCTACCTGGCCAGCATCAGCGAGGAGGTGCTGAAGGAGGCCAAGATCATCCAGGGTGAAATACGGG
CGCTTCTCGACGAGAATCTGCTTCAGGAGACAAAAGCACCCGGCGTCGGCAAGGACGGACTGCTCATGGCGGATGAACTC
AGGAGCTTTTCGGTGACTATTAGCTACGTTTTAGTATCGCCGAAACACTCTTACGCTAGTTACTACTTACGCTATGATGC
TCCCTGGTATGCGTGTGAGCACGACAGCGTGATGCTCGGTGAGATCTCGCCCCATCACGAATACTACGATAGCAAATCGT
CGACGGAGACGCCGCCGAGTTACAATCAGCTTAATTACAACGAGAACATCGAGCGCTTCTTCAAGAGCAAACCGCCGGTC
ACCATGTACGCCAGCGACGAGGAGAACGTTAATTCCAGCAATGACGAAGGCGCGAGGAAGTGTATGTCGCCGATAAACGG
TAGCGGGGCGAGTGGTAGCGGTAGCGCGGAGAATCTGAGCAGCGGTTCCAACAATCAGACAAGTTCAGCAAGTCGGGGCA
ATGCATCTAATACCGCCAGCAACAGCAATACCACCGCGACAGAAAGCTTCAAGCTGCCCACGCTGACGGAATCGCTGTTG
AATCGTCACAATGAGGATATGGAGAAGCTGATGATGCAGAAGCACCGGGAGCTGCGTTCCAGCATCAAGAACAGCGATAA
GCTGAAGGATTCGCGCATCAAGACGGAAAAAGTCAATGGTGCGGATCAGAGCACCCATTATCAGAGTCATGGGGTGAAGA
GGAGTGGTAGTCATAGTTTCAAGGAGGGTGACAGCTTCAAGGCATCGAAGCACAATAAAGTCTCGAGGACAGGCACGGTG
GATCCGGCGAACCTCACAACCACTGTCACCAGCATGAGTCTCGATCAATCGACCGTTGTGCAAACGGGAGCGAATATTAA
CCTGTGGCCGCCGTTGTCAGTCACGGTGCCTTCTTCCATGCCTACTCAATCTTGCGTTTCACCCCATAATACCAATTTAG
AAGCCATGCCCAGATTACCGTTGCTCCCGTCGGTGATACCGGTGTATTATGTGCCGGTATCGCAACTCAGCGAGTCCGCG
ACGACGATGTCGCCGCCGCAAGAGAAGTTAGATCCATCACCGTCAACGCAATCAACGCAACAGAGGCCTTACATTTCCTA
CGTCGCGACGGCCGGAATGATCTATCCGGCGGTGATCGCACCTTCACCTCGCGCTATGATGTATCGCCCCTTTTTGATAC
CCGAGCAAGCACCTATGGCGGCGGTGCGCGAGAACCAGCAGCTGTCCAACGACAACTGTCCGGATCACAAACGACCAGCC
AGTCAGGCGACCAGTATCAAGGCTGAACCGGGAAGTATAATGGCTATGTCCGAGTCTTCCAAGAAGGTTCAATCTCCCGG
TGAGCTGTTCTCGTCGTGCGTAAGCAACGACGGCGGCTGCTCGAGCGTGGTGGATCTCTTGACGCCGGTAATCGCGAAGG
AGCATCGTCGGCCAACCGACTACAACGGAGACGAGTCGAGTTCGTCCAGCTTCTACAGCAGCTTTCTGTATAAAAGTAGT
GACAGCAGCTGCAATCCGGATCAGAAGACGTGCGAAGTCTCCTCCGAGGAACATACCAAGTGTTATCAGGGAATGCTATC
AAGGAGAGATCCGCCCTGGCTGGAGGACGTGCAATTGACGCCAGAATTGATTTACGAGTATCAAATGCATCCGAAGACGT
TGAACGAAGTGCTGAAAGCTGACATGGATGCGATGAAGAATTTCAACCAGCCCTTGTTGGTGAATGACCAGCTGGGACAG
CTCTATTTGGATTTGGAAGTGGAAGGTATCGGCACCGAGCTTATTCTCGAGGAAGGGATCACGTCGAGCGGAAGCGACAG
CGGAAGCAGTAACGGCAGTTGGACGAAATCACAAAGCAAACAGAGAAGAAGAATGATAAAGTACGGCAAGCTAGTGATGA
TTCACGAGGAAAATGGGCCCGTACCGCCTCCATTGCCATCCCAAAGTATATCTTGCCAGCATCGAAATATATCATAG
PEP: 
>PB27286-PA
MEENAKVSDSGYSNTCSQSQRSSGSSNSNSRSNRSESSGYCGRRPSTFGSSNEALPQPISKKKDKEHRKKKSKTVTACNA
AEAEVDPKTVNPLPEVASYNAVTPANVVLDKKPGFCAVISMHDGLVLYTTPTICTALGYLKDAWIGRSFIDYVHPKDKTT
LADQITSGIASPQEERSKGINGRRASLFCGLQKFTRCNVPNGHRANARSNLYLPFHLTLSFRDRTAEQQPSNRAMFLVVT
AQPVHSAYKGSNSNTSAIYHRIWLAVRCLTSIIPRIYLSSKTSMRLLEGSSFRSKPYRFAVQNGGCVVLETEWSSFINPW
TKKLEFVVGQHRVLKGPVDPDIFRVPRDTECGYLASISEEVLKEAKIIQGEIRALLDENLLQETKAPGVGKDGLLMADEL
RSFSVTISYVLVSPKHSYASYYLRYDAPWYACEHDSVMLGEISPHHEYYDSKSSTETPPSYNQLNYNENIERFFKSKPPV
TMYASDEENVNSSNDEGARKCMSPINGSGASGSGSAENLSSGSNNQTSSASRGNASNTASNSNTTATESFKLPTLTESLL
NRHNEDMEKLMMQKHRELRSSIKNSDKLKDSRIKTEKVNGADQSTHYQSHGVKRSGSHSFKEGDSFKASKHNKVSRTGTV
DPANLTTTVTSMSLDQSTVVQTGANINLWPPLSVTVPSSMPTQSCVSPHNTNLEAMPRLPLLPSVIPVYYVPVSQLSESA
TTMSPPQEKLDPSPSTQSTQQRPYISYVATAGMIYPAVIAPSPRAMMYRPFLIPEQAPMAAVRENQQLSNDNCPDHKRPA
SQATSIKAEPGSIMAMSESSKKVQSPGELFSSCVSNDGGCSSVVDLLTPVIAKEHRRPTDYNGDESSSSSFYSSFLYKSS
DSSCNPDQKTCEVSSEEHTKCYQGMLSRRDPPWLEDVQLTPELIYEYQMHPKTLNEVLKADMDAMKNFNQPLLVNDQLGQ
LYLDLEVEGIGTELILEEGITSSGSDSGSSNGSWTKSQSKQRRRMIKYGKLVMIHEENGPVPPPLPSQSISCQHRNIS
Swiss-ProtNeuronal PAS domain-containing protein 1
KEGG     K02633  PER; period circadian protein     
SUPERFAMILYSSF55785  PYP-like sensor domain (PAS domain) superfamily     
Gene3DG3DSA:3.30.450.20     
PfamPF00989  PAS; PAS fold     
SMARTSM00091     
ProSiteProfilesPS50112  PAS; PAS repeat profile.     

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