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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB23609
Positionscf7180000350344:494045..500622[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB23609
sequence mRNA:
>PB23609-RA
ATGATAAAGATATCCGTATCGGGACAAGCATCGCAGTCTGTAAATCACTGGCCAGTGATACATCTAACCTTGAACGGCGA
AGATGAAGACGCTCTGCCGATCGACTCGGTGGAGGATCACCAGACGCGAATAACCTCGGCGCGACCCAGCACGACCAGCT
CGACCAGCACGTCGACCACGTCTCGACCCGGCAAACCGTCCACCACAGCCGCCAGCGGTTCCTTCCAGCATCCGGCCGGC
TATCCGCAGCACTATCAACCACAGCCGCCATTCCCGCAGGTGCACACGAGCCAGTCCAAGTCGTTGTACGACGACAAGAA
CGGCGGCTACCATCACCAGTACATCTTCCACAATGGCGGCGAGCGCGCCAGCAATCAGGCCACGTCGTATCAATTGTTCA
GCAATCAAGGCGCTGTAAGCTCGACCACCGTTCCACCAGCGTCTCCGCCTCCACCGTCCCCGCCGCAGATCCACCAGATT
AGATACAGTTCGACGGTAGGCCCGCCGCCGCAAATCATTCATAACGAACCGTCGACCGTGACGCCGCTATTCCACGCGAC
GTCGTCCACGATTCAGACGTTGCTTAACAGCAACGCGAATAGCCCGGCCTTGATCAACCCCATCTTTCATAATCACGGGA
TCGCGAGCACCACCGAACAGTTCACCGTCCACAGCAACAATCCGCGAGAGACTACCGATTATCGCGATGACAACGATCAG
GAGCAGGATATAAGGACGTTGGAGGCGATACAACCGGCCAACAAAGGCAAGATTTCTAAGCTGGCGATATCTCCGTTACC
GAGCCAGCAAGAGACCTTATCCCGAACGGTACAGACGAAGACGAGTCAAACGTCACAACAGCAACAACAGCAACAACAGA
GAATACCCGGCAATTTTCTACCAACTCCGACCACCGTCGAAACAACCGTCAGATCGTTCTATCCGACACCGAGGTCTTCG
CCGAAGCCCTTGCAAATGTCGCAGTCGGTCACTCACCAGGTTTCCCAACACATCCATGTGTCACCGAGCGTGACGGTGCC
GCAGCTCAAACATCATCAGATCACCATCAATTTGCCACCGCCGGATATTCAGAGAATTGTGCAGAATCCATCACCTTTGC
TACCATCACAATCCCGAGTTATCGTCACAGCGAAGGCGAGCGTGAGCGACGAGTCCGGTAGGCCCCTAAACACTACGCAA
CTGGTGACATTGCCGTTGCCAACGATACCGGCCAGCTACGACGACTATAAAGAAGGCGATGAATCATTCGATCCTTTTTA
TCGCGATGTTCCGAAAATTCGCAAAAATCGCCAAGCCACAACGGAAAAAATAAAAGTTTTGCGGAAGAAACGGTCGCTCG
ATCAACCCTTCCACTTTATTTATGGGGTGGCCAATGATCAAAGCAGAAATTTCAAAGTGATAGAGAAGAGTGAATTACCT
CAGAATGAAAATAACGCGATGAGAAGAGCACATGCCGAAGTTGATTACCGGACTATTAAAGACAGTTTAATCAAATTTAA
AGATGTTTTATTCAGCAACGAAGAAAACGATGATTCTTTCCGTAAAAGTGCTGAAGAAGTTAAAAATAATACCGAAAGCG
TTGTGAAAGATGGCGAAATTTTTGATAAAACTCTTGTAAAGCAGGAGAAAGACAATGCGATAAAAAGATATGATTTAAGA
GACTTGAGCACAGAAGCATCAGAATATTTGAATCTAAATAAAAATGAGGATAAAGATGAGGAAATGAGTCGCGCAGATTT
CTTTTCAAATGTCAAAGTTAACACTGAAAATAAAGAAAAATCTCTCAAAGAATTAGAAATTAACCTCGAATCTACGACTC
TTCGCCCTCGAAAAGACGAATCTCGAGGAGACGTTATAGACGTAATAATACTCGATTCCGACAATGATTTCAAAGTGAAA
GCCGCATCTAAAGCAAAGACTGACGCGCCTATCGAGATTATCATCGAGGAGGAAACGAAATCTGGCACGCAAGACGCGTC
GAAGACTAACGAGAAAGTTGCACAGAAGGGACACATCGCGGGATACCTGACAAAAGATGAATCAAACAAGCAATTGAATT
CCGTCGCCGGCGAGAGAAGACAACCGACGGTTCCGCATGAGACGATCAAGCGAAAGAGTGCCAAGGATTCCGGAGAACGA
AAGTCTGGTTCGAGGCGGAAGGGCTTAAGATCTAGGTCGTCGAAGAGGCGCATCTCTTCGAGAATAAAACAGCAAAGAAC
GGATAATGTCGAAGCGGCAGAAACAATTCAGTCAGGAAAAGATGTGGAAGAATTGCCTATTACCGAAAAAACGATTCGTA
CTATTGTTATTACTACTGTTGGTACTACTACTACTACTACTACTACTACATCTACTACTCCTATTCCTCTTCCTCATCCT
CCTTCTACTACTACTACTACTACTACTCCTCCTTCTACTACTACAACTACAACTACTATTTCTACTCCTACTACTACTAT
TCCTACTACTACTACGACTACTACTACTACAACTACTACTATTACTACTCCTACTACTACTACATCTACCACTACCATGA
CCCCATCCGTTGCACTTTTGGATGTTGCGGAGCAAATCGATAGCCACATTTTCGGTGACAATTTAGAATCACAAACTTTT
AAAGAACTAGGCACGAGGGCGATCGGTCAACGTGACGCAATATATTCGAAGAGTTTGCAAGATGGCAAAAGCTACCACGC
CGGCAAGAATAAGGAGATAGAACGATCGTTCGAACATCAGATTGTAGATAATCGCGCGATAGATTCAGAACTACGCGTTG
ATAAAAGGGAGGACAGGAAACGGCAAACGGAATCGACGAATTACACGCAAAATGACGAAAAGGATGCGACCTTCATTGAA
AATCCTCGAAGTGTAGAAGAAGAAGCCGAATTGACGGAAGTCACGCGTGTATCCGAAGAAGAAAAATTTTCCAATGAACA
ATCAGACGATGATTTTAATGCGAATAACGGAGAATTCGAAGAAAACTTGCAAGACGAAGTTGTGACTTCTCATGAACTCA
ACTCGGAGCTAGAAGAATCTTATCCCGAAAATGCAAATGAGAAATCAGGCACCGATGTTTTAGATGAAGTGCAACGTTCA
ACTACAAGATACAGCGAAGAAGTGGAAGCTTCCGAGGAATTGAACGAATATCAGGACATAACGGAATCATCCGCAGAAAA
TACACGTAACATTCAAGAGGATTACAAGGAATCAGAAAGTACTGAGAGTTCTATAACGCTCGCGGATTACACGAATTCTG
AGGAATACACCGATTCCCAAGAGGACGTTGCGGCCTCGACCGAGGATGCCGGAGGCAGTACCGAAGGTGTTCTAAAATTT
ACAGATGAATTATCGAAATCAGATGACGAGGAAGATGCGGAGACGACAGAGGAGACATCAGCATCCGATGAAAGCAATGC
ACACGATTATATCGACGATAATTATGAACCGGAGAATTACAAGGAAATGGAAACCACGGTAGAACCAAACGATTTCGAGA
AAAACGAAGAGAAAGACGATGAAGAGAAAAAGGATACGACGATAAAAGAGCTTGATTATACGACTGAAACAACGCAACGG
ATCGATGACAGTGCTGAAGCAGAAACGCAAACTGAGTATGCGGTGGGTGTTACAAAGATTGAGAATCTTCATGAAATTGC
AAGTTTAACTACGACTTCATCAAGCACTACGACGTCATCGACCACATCGACGACATCGAGCACATCGACTACGACTACGA
CTACCACTCCTCGACCAAAAATTACTCGTCGACCAACGACTACCACTACCATTCGTCCACCGAAACTCTTTAAGCCTACC
GGAAATAGAAGGATTTATGCTTACATTCCTCCTACGACAACTCCAAATTCGGTCGTGATTAAACCGAGATTAGGCCTGTA
CAATCCGAAACCGGCGAAACCGCCCAAATCGTACAACGAGTTGGCACCAAAGCCGATAATTAGGAAGCTTACTTTATCGC
GAAAACCATCTATCACCACTGCAGCTACTACTACTATTATTACTACCACTATGGACAAATTAAATACGGAAAATTTAGAA
ATATCGACGGAGCCAGTGACGATGACGATGATGACAGAAGTAACAAAAGCAATGGATACGACGACAATGACACCGACAAT
GGCGCCGGAAACGACGGTAACGGAGGCGACGACGGCAGCGACGACAACATCGACAATGATGACAGAAACGACGGAAACAA
TAACAACAGCGGCGACAACGACAACGCCAGCAACGACGTCAGCGGTAGAATCTGGTAGAAGTGAAGAGAACGTCCTTGAA
ACTAAATTGGAAGCAAACGATCATATATTCTTCGATCCTTCAAAGAATGATCAAAAAGACAAGGAAGATCAACTTCCGAG
TCCATCTGAACAGAACACTTCAGCCAACTCTTCAAAGAGCACTGATTCGGCAATCACGATCAAGACGATCGAAACTTTCA
CCCCTTACCCTCTGTCCAAATTATCTACCCTCGAATCTTCTGCAGAGCGGACAACAAAGATGACGATGGATGTTAATCTT
CAAGACACGACGGAAGAGAGCGACGAAATTCTCACGACGACTGTCTCGCCGACGACGTTACCGTTCAAAAAGACGTACGA
ATATGCCGAGATCACTTCGAGTACCGAAAAGTATCTTGAAGCAGCGAAAACTTCCACGACAACTTCCACTTTCGAAGTAT
ATCCAGAGGATATCGTAGAGACCACTTCGGTCTCTTCAATTCCTCCGGTTCCCGAACGCGCGACACCGGTCTCCATCTTG
ACGACCGTCTCGCCTAAAGCGGAGGACACCGATTCCGTCACGTCGACGGGAGCCGTAATCGTCAGACCAAACGGCCGGAA
GTCCGTAATTATGCGGAAGCACGCGAGCTTCAATTGCCTGGAGAAAGAGATGTATCGCTTCTACGGCGACACCAGGGACT
GTCGATTGTTCCACTATTGCTCGCCCGGCTTCACCTCGCGGCAGGTGCTGGACTTCCGGTTCGTGTGCGAGGAGGGCACG
ACGTTCGACGAGGTGACGCAGAGCTGTCGTCACGACGTGCCTAACCGGAAGTGCCGGAACCGCTCCTGGTGA
PEP:
>PB23609-PA
MIKISVSGQASQSVNHWPVIHLTLNGEDEDALPIDSVEDHQTRITSARPSTTSSTSTSTTSRPGKPSTTAASGSFQHPAG
YPQHYQPQPPFPQVHTSQSKSLYDDKNGGYHHQYIFHNGGERASNQATSYQLFSNQGAVSSTTVPPASPPPPSPPQIHQI
RYSSTVGPPPQIIHNEPSTVTPLFHATSSTIQTLLNSNANSPALINPIFHNHGIASTTEQFTVHSNNPRETTDYRDDNDQ
EQDIRTLEAIQPANKGKISKLAISPLPSQQETLSRTVQTKTSQTSQQQQQQQQRIPGNFLPTPTTVETTVRSFYPTPRSS
PKPLQMSQSVTHQVSQHIHVSPSVTVPQLKHHQITINLPPPDIQRIVQNPSPLLPSQSRVIVTAKASVSDESGRPLNTTQ
LVTLPLPTIPASYDDYKEGDESFDPFYRDVPKIRKNRQATTEKIKVLRKKRSLDQPFHFIYGVANDQSRNFKVIEKSELP
QNENNAMRRAHAEVDYRTIKDSLIKFKDVLFSNEENDDSFRKSAEEVKNNTESVVKDGEIFDKTLVKQEKDNAIKRYDLR
DLSTEASEYLNLNKNEDKDEEMSRADFFSNVKVNTENKEKSLKELEINLESTTLRPRKDESRGDVIDVIILDSDNDFKVK
AASKAKTDAPIEIIIEEETKSGTQDASKTNEKVAQKGHIAGYLTKDESNKQLNSVAGERRQPTVPHETIKRKSAKDSGER
KSGSRRKGLRSRSSKRRISSRIKQQRTDNVEAAETIQSGKDVEELPITEKTIRTIVITTVGTTTTTTTTTSTTPIPLPHP
PSTTTTTTTPPSTTTTTTTISTPTTTIPTTTTTTTTTTTTITTPTTTTSTTTMTPSVALLDVAEQIDSHIFGDNLESQTF
KELGTRAIGQRDAIYSKSLQDGKSYHAGKNKEIERSFEHQIVDNRAIDSELRVDKREDRKRQTESTNYTQNDEKDATFIE
NPRSVEEEAELTEVTRVSEEEKFSNEQSDDDFNANNGEFEENLQDEVVTSHELNSELEESYPENANEKSGTDVLDEVQRS
TTRYSEEVEASEELNEYQDITESSAENTRNIQEDYKESESTESSITLADYTNSEEYTDSQEDVAASTEDAGGSTEGVLKF
TDELSKSDDEEDAETTEETSASDESNAHDYIDDNYEPENYKEMETTVEPNDFEKNEEKDDEEKKDTTIKELDYTTETTQR
IDDSAEAETQTEYAVGVTKIENLHEIASLTTTSSSTTTSSTTSTTSSTSTTTTTTTPRPKITRRPTTTTTIRPPKLFKPT
GNRRIYAYIPPTTTPNSVVIKPRLGLYNPKPAKPPKSYNELAPKPIIRKLTLSRKPSITTAATTTIITTTMDKLNTENLE
ISTEPVTMTMMTEVTKAMDTTTMTPTMAPETTVTEATTAATTTSTMMTETTETITTAATTTTPATTSAVESGRSEENVLE
TKLEANDHIFFDPSKNDQKDKEDQLPSPSEQNTSANSSKSTDSAITIKTIETFTPYPLSKLSTLESSAERTTKMTMDVNL
QDTTEESDEILTTTVSPTTLPFKKTYEYAEITSSTEKYLEAAKTSTTTSTFEVYPEDIVETTSVSSIPPVPERATPVSIL
TTVSPKAEDTDSVTSTGAVIVRPNGRKSVIMRKHASFNCLEKEMYRFYGDTRDCRLFHYCSPGFTSRQVLDFRFVCEEGT
TFDEVTQSCRHDVPNRKCRNRSW
Swiss-ProtCoiled-coil domain-containing protein 80
SUPERFAMILYSSF57625  Invertebrate chitin-binding proteins superfamily     
Gene3DG3DSA:2.170.140.10     
PfamPF01607  CBM_14; Chitin binding Peritrophin-A domain     
SMARTSM00494     
ProSiteProfilesPS50940  CHIT_BIND_II; Chitin-binding type-2 domain profile.     
CoilsCoil

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