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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB26739
Positionscf7180000350270:502749..508413[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB26739
sequence mRNA: 
>PB26739-RA
ATGTGCATGTGCTGGGTTCAGGACGATGATGATGATTTCACGAAGATGGACATTAGTTGTATGGGAGTTCCATTTGCGCG
ATTTCCCGATGTATCGGTGAGTTATGTGGCACAATTAGACATCGCTGGTTCCGGGATACAAATGTTGGACAATGACGCAC
TTGCAAGTTCCGCAGGTGTCGAGGCTCTTGGACTAATGAGCAATCGATTATCCAGCATAGGTGATAAATCTCTATTAGGT
GTTACGGACAGTCTACGTTCCTTGGACCTAAGCTACAACTCTCTCGAGGATGTGCCTTTCAAGGTTTTTCGTGATTTAAG
GAAATTAAACTGGCTTAATATGCATAGTAATCATCTAACGTCGTTGGATGGTGACTGGGGTCGCACTAAGGAAACTTTGA
CAAACGCATTTTTCGGCGATAATTCGATCACTGAAGTGCCCAAGATTTTCTCAAACTTCGCTTCCCTGGTATGGTTGAAT
CTGGACAGTAATAACATTGAGGAACTTTCCAAAGATTGTTTGCCACCGAACATGCACACTTTGAGCATTAATAATAATCT
CTTGAAAGAATTTCCACAGTCCTTGGGAGATCTGAAAGAATTAACCTGGCTCTATATGAGAGGAAATGACCTTAAATATC
TAGAACTACCAGATTTTCGTAGTTCCAATTTAGAACTGATTGACATCAGCGAAAATTCCATCGAATGGATGAAGACACCC
ATCTTGAGCAATCATACTATGAAGGTCAGAGATTTTAATCTAGCTGGGAACAAACTGATCTCGTTGCCAAGCAGAATGTT
CGATCGTCTTGAGGCTAGAAGAATCCACTTGTCGTCGAATAGTATTAGAAACGTTGACAAAGAAGCATTTCGTGGTTTGG
AAGATATTCTCGAATATTTGAATTTGGAAAATAATGATCTGCCGGCGGTACCGAGCGCTGTCAGCCAATTGAGAACATTG
TCGTATCTCTATTTGGCTAACAATGAGATTAGAAATATTTCTGGCGAAGCTTTTCAAGAATTTGCGGAACATCTAAAAGC
TCTTTCTCTTGCAACCAACAGTCTGGATGCAGTACCTGTGGCTGCTTTATCCAGATGCCAGAGGCTACTGCACCTGAATC
TCGGTTACAACAAGATCTCTCACGTCGAGTCGGGTGATTTCGAGTGGGCCGAGGACCTTGAGATCCTATTGCTCAGGAAC
AATATCCTGACGAAACTGAAAGCCGAGACCTTCAAGGGAGCCGGCAAATTAAAGGAGCTCAGCCTGTCCTTCAATCACTT
GACGGAACTCGACGACGACTGCTTTGTTGGTCTCGAAGAGAGTCTGGATATTCTCGAATTGAGTTTTGCCTTCGCTACAG
ACGTCTTTCCTCAGCGTGCACTCAGACCACTCTCGAACCTTCGATGGCTGGTCTTAGATAATAACAACTTCCAGACAATC
GAGGCGACAGCTTTTTATTCCTTCCAACAGCTGCGTTATATCAACATGGAATCAAATAGGCTGCACTACTTGCCTGAAAG
AATATTTCTCTCAAGCGTGCATCCGGAGTTAAGGGACGTCAAGTTGGGATACAATTTTCTGGAGGCAATTCCAGAATCAA
GTTTCCATAATCTAACAGAGTTGTTGTCTCTCGACTTGACCGGCAATCGCATAAGAGTCTTGACATCCGACTCCATCGTG
GATTGTCCAAAGCTCGTGACCATATCTTTGGCTTATAATCGGATACAAAAGATGGAGAGAACCGCGTTGTACGGTTTGTC
CAGCTTGCGTTTCCTCCATTTAGAGTTTAATAAATTGACCGTACTGGATTTGGGTGCTATCGCGGAGATCGGCGGTCCCG
ATTTTGCTTTAAATGTTTCCTACAATGCGATCGCCTTCGTCGACTCGGGATCTATGATGAATAATCTTACCAGATTGGAC
CTTGGATTTAACAATATTAGCCATTTATCGGCAGATACATTTTATGGAACACCCGATTTAAAGAACTTGCATTTGCAAAA
CAATTTTCTCTCAACGCTTGATTCTGGAACATTTGCGTTTCCTCATTTGGAAACACTAGATCTAAGCAATAACAGGATAG
ACACATTGCGCAAGCAATCCTTTCACGGTTTAGAATCCCTTCAGTGGTTAAATCTCGGTGGAAACGAAATAACGCAATTG
TCGACGGAGCAGTTTAGAAATTTAAAAAATCTCAGGATCCTAATTCTCTCAAACAACAAGATTCGTTCGTTACCGAAAGA
CGTTTTTGAGGGCACCAGATTAGAAATCCTCGATCTCAGCCACAATAAATTTACCGTCGTGCCCTCGTCGTCATTCTTGG
AAGTCGGCTATACTCTAAGGGACCTCAACATGGCGGAAAATTTCCTGGATCACCTTGACTCGACTGCTTTCCCGACTTCT
CAGCTGGTATCCCTGAATCTGGCGCAAAATCGTCTGACTATTCTGCCAGATAATTCATTCGTTTCCCTGGGGAAATTACT
GAGCCTGAATGTATCTCAAAACACTCTCCAGGCAAACTTTAAAGAGTTATTTCATTACTTGCCTGATCTTAGACAACTCT
ACTTAGCTAACTGCGGCCTTAGGAGCATACCGTTACTGCCATTGACGAATCTAAATATCTTGGATTTGTCCTTCAACAAT
GTCGACGAGACTACTGAAAAGCAGTTTCAATATTTAGAAGGCTTGAAGATTCTTTTACTGGTGAATAATTCGTTGACATC
GATGCCTGGTGTTAGATTGAGTCTTTTGAGAGAACTCGATGTTTCTGGCAATCCAATCGAGGAACTGACGAAAGAGAGCT
TCCTGGGCTACCCAAGATTAGAAAAATTAAACTTACGAAATCTAAATCGCACCAGATCAGTAGACAAGGATTGTCTGCAA
CCCTTAAAATATTTAAAACATCTGCGAATTCAAACGTGGCCGCAGGCCGACGGGTTTCATCTGCGTCAATTACTGTCTGG
GTTACCGCTTCGAATGGTCGAGATTCAGGTGACAGAGCACCTGTTGAAAAACCAGATACAAAACGTCTTCACAAAGCAAT
TGAGAGAATTGACGATCACCGGAAATAATCTTGAACTGATCTCTTCCGAAGCATTCTCCACTATCGAAGGCGGAGAATTA
GTATTGAGAATCAAAGACACTCACGTTCAACGATTACAATCAGATATTTTTCTATCGTTAACGAAGAGATTGTCGCAGCT
TACTTTGGACCTAAGAAACAATTATATCAACGAATTGAGTCCGTCGATAATTTACGGGAATCTTTCCTGGGAGACTGTAG
GGACCAACATGGTGGCCGGTGGATTACAAGTGTCTGGCAATCCGCTCGAATGCGATTGCGAGATTGCGTGGCTGAGTCTG
TGGCTGCGTAGGTGGCTCAGAGAATCCCGACAGATCCACACGGCATCGCAATCCGATGCTAGACAACTCAGAACTATAGC
TGGCCGTGCTGTGTGCACGGAAACAACTCCATCATACTCCTCCGACAAAGTCCTGCTAACTCTGGGCACACCGCACACCG
CTTGCCAAGCGTCCGCTCTTAGCTCGGGAAATTATGAGCGGCTGGCGACAGCTTGGTTAGCCATTGTCAAATTCTTCATC
CTCATTTTCATCGCCAATTAA
PEP: 
>PB26739-PA
MCMCWVQDDDDDFTKMDISCMGVPFARFPDVSVSYVAQLDIAGSGIQMLDNDALASSAGVEALGLMSNRLSSIGDKSLLG
VTDSLRSLDLSYNSLEDVPFKVFRDLRKLNWLNMHSNHLTSLDGDWGRTKETLTNAFFGDNSITEVPKIFSNFASLVWLN
LDSNNIEELSKDCLPPNMHTLSINNNLLKEFPQSLGDLKELTWLYMRGNDLKYLELPDFRSSNLELIDISENSIEWMKTP
ILSNHTMKVRDFNLAGNKLISLPSRMFDRLEARRIHLSSNSIRNVDKEAFRGLEDILEYLNLENNDLPAVPSAVSQLRTL
SYLYLANNEIRNISGEAFQEFAEHLKALSLATNSLDAVPVAALSRCQRLLHLNLGYNKISHVESGDFEWAEDLEILLLRN
NILTKLKAETFKGAGKLKELSLSFNHLTELDDDCFVGLEESLDILELSFAFATDVFPQRALRPLSNLRWLVLDNNNFQTI
EATAFYSFQQLRYINMESNRLHYLPERIFLSSVHPELRDVKLGYNFLEAIPESSFHNLTELLSLDLTGNRIRVLTSDSIV
DCPKLVTISLAYNRIQKMERTALYGLSSLRFLHLEFNKLTVLDLGAIAEIGGPDFALNVSYNAIAFVDSGSMMNNLTRLD
LGFNNISHLSADTFYGTPDLKNLHLQNNFLSTLDSGTFAFPHLETLDLSNNRIDTLRKQSFHGLESLQWLNLGGNEITQL
STEQFRNLKNLRILILSNNKIRSLPKDVFEGTRLEILDLSHNKFTVVPSSSFLEVGYTLRDLNMAENFLDHLDSTAFPTS
QLVSLNLAQNRLTILPDNSFVSLGKLLSLNVSQNTLQANFKELFHYLPDLRQLYLANCGLRSIPLLPLTNLNILDLSFNN
VDETTEKQFQYLEGLKILLLVNNSLTSMPGVRLSLLRELDVSGNPIEELTKESFLGYPRLEKLNLRNLNRTRSVDKDCLQ
PLKYLKHLRIQTWPQADGFHLRQLLSGLPLRMVEIQVTEHLLKNQIQNVFTKQLRELTITGNNLELISSEAFSTIEGGEL
VLRIKDTHVQRLQSDIFLSLTKRLSQLTLDLRNNYINELSPSIIYGNLSWETVGTNMVAGGLQVSGNPLECDCEIAWLSL
WLRRWLRESRQIHTASQSDARQLRTIAGRAVCTETTPSYSSDKVLLTLGTPHTACQASALSSGNYERLATAWLAIVKFFI
LIFIAN
Swiss-ProtLeucine-rich repeat-containing protein 28
SUPERFAMILYSSF52047  RNI-like superfamily     
Gene3DG3DSA:3.80.10.10     
PfamPF00560  LRR_1; Leucine Rich Repeat     
SMARTSM00364     
ProSiteProfilesPS51450  LRR; Leucine-rich repeat profile.     

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