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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB14215
Positionscf7180000350042:960444..963836[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB14215
sequence mRNA: 
>PB14215-RA
ATGGCCGAGCGCTGCCGCATTTGTTTGATCGACCACGGTTGCATGACGAGTCTGAATAATGAGCGCGTAGAAGCCAAGCT
CAAGGATCTGACCAAGTGTACCTGCATCGACATCAAGCTTGAGGATAATCTGCCTGGTGTTGTATGTCATATATGCTTGT
ATAAACTGAATATGTGGACTGAATTCAAAGAACGTTTCATACAATCCAACAAAGTTCTTCTGGAACAGCTTGAGGCATCA
GAAGTATGTGATGATACTGTAAGAGATACTTCCAAGGATGAAAATCAAGTATCAACAATTATAAAAAGGAAACATGGTGG
TGAGAATGCCAGTTCAGATGTTGAGCAGAAAAAATCAAGACTCAATATTCCAGATGTTCCAAATGTCACTTGTAACAGCA
CAGGTCGGGTTATATTAGATACGATATCTCTTTTGTCAGACAATGATGATTTAGATTCATCTAAAAAGGATGCAAGAAAC
AGCGACAATAATACGGAAAATAAAATACATTTGGAACCAATGAGAGCTAGATTACTACCCGCGAGACGTGGCAGAAATAT
TGAACGGAGAAAGGCATCTACAAAACGTTGGGTGGAGAGAAAGAAGGCTCTTTTGGCTGCAACGGGAGAGGCAGTATCTG
ATACCGACTCCATAGCTTCCGACGACGTGCAATTGTCGCCTGTGCAAAAGGCACGAGCAAAGACCAATGCTGATAAGGAA
ACAGAGAAGCAGAAGAAGATCGCAAAAGTGCTGAAAAATCTAGAGATGAATCTCACGGAGAAGTACATCGGATATCGCGA
CCTCGATACGGATTCTGATGCGCGCCGAACGAGACTGAGCAGAGAATTGCACATGCAAAGTTCGCCACAAAGTAACAAGA
ATTCGTTGTTGAATCAGATCAATAAAAGAACTAGATCCTCTCTAGAAAGCTCTATAGAAACGGAGAATGCTTCCGTTTCG
GCTAATGTGACAGACAAGACAAAAAAACTTGAAACGCAACTTGATGATGAAAATTTCGTGCCTCATTCGTTGAAATCCGA
ATTGGTAATCGGTGATACCACATATACTGTAACAACAACATTGAGTCTCGTGAATCCATTACAGATTGACAAAGAGAATT
TAAATAATTCAAAGGATTCGTCGAAGAGTCTCGACGATAGCAATCGTGAGAAGAATACTGATATCATCGATGCGGTTCAG
TTGCGTAGAGTAAATCCTGCACCCACCAAGACAAGCAGCAAGCCCATTAACAAATTCGTCGAAAGATGTTTAAATATTGA
AGTAGAGGGAAATGAATTGAGCGTTCTAAAACGCGTACAATACGAATTGGCGGATTTCGTCGAGAAGGAAATGAAGCAAA
AATTATTAAATACGAGCGACAGCGTTGCAAAATCCTGTAAAATAGACAGCGTCAGTACAAGTACTTGTCAAAAATTGGAC
CATAAGTTGAAAGAGATAATAGAACTGGCTATAAAAAAGAATATCGATCCCGATATAATTGCAAAAATGAACACGAGCAG
TCAGGAATCTACAAGATTTTCGCCGTCATTAGTGAAATCTGTTAAGAACATGCCCAAGTATCAGCCAAAGGTCGTGATAG
AACGTCTAGATATAGCAAAGGAGAGTAAGCATTATAATATTAATAACGCTGTCACGCCGAGGGAGATTACGCAAACTATG
TCTACTACGAAGAGTAAACTTGCTGGTCCATTTAGCGCGATTAGTCGTAAACGTCAGAGTATACCTCCGTCAAGATATGG
TGAATATAACACCTTCGGATTGGATTCGGAGTTCTCTGACGATACATCAGACGATTCATTCGTTCTAAAGACACCCAAAG
TAACCAAACCGAAAATGCCAGGAACTTCAACAGCGAAACAGTCGACAGGAACGAACAATCGACTCGTCAAGGAAAATAAG
GTCGAACAGAAACCTGATTATGAAGAGGCTATCAGAATAGAAGGTGCCATAGCTGAAAACCATATATGTGGCGTGTGCGG
GCTTACGTTCCATACCCGCAAGGAAGTCGAGGCACATGTTCGCACTCATAAGATGGCACCGGGCATCACTGTCACTCAGA
TCGTGCTGCAAGATGAGAAACCAATGCAGCTGCCAAAGAAACCAGGACGGCCAAGCAAGCAAAAGATGATGCGTTGCAAA
AGGTGCCATGAGATAGTAGAGGCACGTTTCGTTAAAGCGCACATATGCAAGTTACTATCTCACAAGTGCTACGTTTGCGA
TTCCGTGTTCCGCACGAAGAACCTTCTTGCGAAGCATTTGGAAAGCCACGAGCATTCCGAGTTCAACATAGTAAACGCGA
TCGAAAAGAAGAAAGTTAACAACAATGACTCGTTGCTGAAAATCATGTCGGTTGCGTCCGCATCACCGCAGAAGGATCAA
GCCCAGGAAACTGAGACCACGCCGAAAACGCAGACCATTCAAATTGAAAAAAACGACATCCAGTCCGATAAGATAACCAG
CACGGGTGTGAAGTTGGACAGCACTGAAAATATAGTAAGCCTGAGTAAGCCCAAGGAAACATACACCTGTTTCGTGTGCG
ATAAAATTTTCACAGACGAGGAGGTGCTGAAGGATCACTTACAAAAGCATTGCGATGATTTGAGTGAAGGGGAAAATAGT
AATAGCAAAGAACAGTACCAATGCGCTATTTGTGGTAATACTTTGGAATCGGATCAAGCGTTGGAAGAGCACGTCGGCAA
ACACTTATTCGACGATGAAGATGACAATCCTAATTTAATTAGTATCGACCAAGACAAGGAGAAAAAATCGAGTGAAGTCG
AGGCATATCAATGTGGCCAGTGCTCGGAAACATTTAATTCGGAGATGTTATTGGAAGTGCACATGCAAGCACACGAGGAG
GAGGTTGCGATAGCAGAATGGGAGAAGCAAGAAATGAAGGTCTATCAATATCAGTGTATGCTTTGCGATGCATTGCTTAA
TACCGAAGAGGAATTGGCGAAACATTTGGATGTGCATAACGCAAATACATATATATGCCAGTTATGCGACAAACCGTTCC
GCACGCTACATGATCTACAAGAACACGTCGCAACTCATTGA
PEP: 
>PB14215-PA
MAERCRICLIDHGCMTSLNNERVEAKLKDLTKCTCIDIKLEDNLPGVVCHICLYKLNMWTEFKERFIQSNKVLLEQLEAS
EVCDDTVRDTSKDENQVSTIIKRKHGGENASSDVEQKKSRLNIPDVPNVTCNSTGRVILDTISLLSDNDDLDSSKKDARN
SDNNTENKIHLEPMRARLLPARRGRNIERRKASTKRWVERKKALLAATGEAVSDTDSIASDDVQLSPVQKARAKTNADKE
TEKQKKIAKVLKNLEMNLTEKYIGYRDLDTDSDARRTRLSRELHMQSSPQSNKNSLLNQINKRTRSSLESSIETENASVS
ANVTDKTKKLETQLDDENFVPHSLKSELVIGDTTYTVTTTLSLVNPLQIDKENLNNSKDSSKSLDDSNREKNTDIIDAVQ
LRRVNPAPTKTSSKPINKFVERCLNIEVEGNELSVLKRVQYELADFVEKEMKQKLLNTSDSVAKSCKIDSVSTSTCQKLD
HKLKEIIELAIKKNIDPDIIAKMNTSSQESTRFSPSLVKSVKNMPKYQPKVVIERLDIAKESKHYNINNAVTPREITQTM
STTKSKLAGPFSAISRKRQSIPPSRYGEYNTFGLDSEFSDDTSDDSFVLKTPKVTKPKMPGTSTAKQSTGTNNRLVKENK
VEQKPDYEEAIRIEGAIAENHICGVCGLTFHTRKEVEAHVRTHKMAPGITVTQIVLQDEKPMQLPKKPGRPSKQKMMRCK
RCHEIVEARFVKAHICKLLSHKCYVCDSVFRTKNLLAKHLESHEHSEFNIVNAIEKKKVNNNDSLLKIMSVASASPQKDQ
AQETETTPKTQTIQIEKNDIQSDKITSTGVKLDSTENIVSLSKPKETYTCFVCDKIFTDEEVLKDHLQKHCDDLSEGENS
NSKEQYQCAICGNTLESDQALEEHVGKHLFDDEDDNPNLISIDQDKEKKSSEVEAYQCGQCSETFNSEMLLEVHMQAHEE
EVAIAEWEKQEMKVYQYQCMLCDALLNTEEELAKHLDVHNANTYICQLCDKPFRTLHDLQEHVATH
Swiss-ProtPutative zinc finger and SCAN domain-containing protein 5D
SUPERFAMILYSSF57716  Glucocorticoid receptor-like (DNA-binding domain) superfamily     
Gene3DG3DSA:3.30.160.60     
PfamPF00096  zf-C2H2; Zinc finger, C2H2 type     
SMARTSM00355     
ProSiteProfilesPS50157  ZINC_FINGER_C2H2_2; Zinc finger C2H2 type domain profile.     
ProSitePatternsPS00028  ZINC_FINGER_C2H2_1; Zinc finger C2H2 type domain signature.     

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