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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB24615
Positionscf7180000350367:381920..387354[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB24615
sequence mRNA:
>PB24615-RA
GTGATTATCCAAGGATTTAAATCCTACCGTGAACAGACGGTCGTCGAACCTTTCGATCCGAGACATAATGTAGTAGTTGG
CAGAAATGGGTCTGGCAAAAGCAACTTCTTTTATGCTATTCAATTTGTCCTAAGCGATGAGTTCTCTCATCTCAGGCCTG
AGCAGAGGCAAGCACTACTACATGAAGGAACGGGACCTCGTGTTATATCTGCTCATGTAGAAATTATCTTTGATAATTCC
GATGGAAGATTACCGATTGATAAAGATGAAGTATATTTAAGAAGAGTGATTGGCTCCAAAAAGGACCAATACTTTCTCAA
TAAAAAAATAGTGACAAGGAATGATGTGATGAATTTATTGGAATCAGCAGGATTTTCTAGGTCTAATCCTTACTACATTG
TAAAACAAGGAAAGATAAATCAAATGGCAACAGCACCAGATTCACATAGATTAAAATTATTAAGAGAAGTAGCAGGTACT
AGGGTATACGACGATAGGAGAGAAGAGTCGAAATCCATTTTGAAAGAGACAGAGGGAAAATTAGAGAAAATCGAGGATTT
TCTGCGAACAATAGAGGAACGTTTGAAAACACTCGAGGAAGAAAAAGAAGAACTGAAAGAATATCAGCGTTGGGACAAAC
AACGTCGATGTTTAGAATATACGATTCACGAACGTGAACTTAAAGAAAATAAAAGAAAATTAGAAGAGCTGGAGGAGTCT
AGAGCGAATAGTGGAGCCGAGCAGGCGAGATTGGGAGCAGAAGCCAAAACTGCTCAAGAAATGGTACGTGCAGCTACAAA
GAGGCTAAAAGAAGCAAAAAAGGAAGTACAGACTGCCAAAGAAGAAAGGGACACTCTTAGTGCTGAACAGCAGCAATTAC
TAAAAGAAAAGAATAAGTTGACTTTTACCATTAACGATTTGTTGGAAGAGGTAAAAGGTGATAATGACAGTAAAAAACGT
GCTCAACAAGAATTAGAAAAGTTGAAGGCCAATATTGCTCTTCGAGAAGACGAGTTGAAATCTCTTAAACCAGAATATGA
ACGAATGAAACGTGTTGAGGAAGAGTGTACACGAGAATTACAATTAAAGGAGCAGAAACGTAAGGAATTATATGCTAAAC
AAGGTCGTGGCAGTCAATTCACCACTAAGGATGAAAGAGACAAGTGGATACAAAATGAGCTTAAACAACTTACCAAACAG
ATAAAAGATAAAGAAGAGCATCAAAAAAAGATCAGCGAAGATTTAAAACGTGATGCAGAAAAACAAATTGCCTTGGAGAA
GAAAATAGGAGATCATACGCGTGAAATGGAACGACAACGTGCGTCAATAGATGATCATAATAAACAATATTATGAGCTTA
CCAAAGCGAAAGATCAGTGTCAAGCAACTCGAAAAGAACAATATCGGCAGGAGAGTGTATTGCAACTAAATCTATCTGGT
CTTAAAGAAGATTTAGCAAAAGCAGATCAGAGTCTAAGATCCATGGCTGGTAAACCTATTTTAAATGGCAGGGATAGCGT
ACGTAAAGTATTAGATACTTTCCGTGGACGGAAAGATATGGTTAATGAAGTAAGCAGTTATTATGGGCCTGTAATCGAAA
ATTTCAACTGCGACAAGAGTGTTTATATGGCCGTTGAAGTAACCGCTGGGAATCGGTTGTTTCATCACATTGTGGAGACC
GATAAGTTTGGCACAAAGATTTTAAAAGAAATGAACAATCAACGATTGCCTGGAGAAACTTTGATCTGCCGCAATCTGGA
GGCAGCAACAACTTTGGCGCGAGATTCCGGTTTGGACTGTGTTACATTAGAAGGCGATCAGGTTTCATCTAAAGGCTCCT
TAACTGGCGGATATTTCAATACACTCAGATCACGGCTTGAAATACAGAAGACAAGATCAGAATTAATGTCTCAGATTTCT
ACTTTGGAGACCCAATTAACAACGCTTAAAGAAGAAATCAGAAAGGCGGATCAAAATATTAGTTCTTACGTTAGTGAAAT
GCAGAGGACTGAAACCAGAAATAGTAAAGCTAAAGATATATATGATAAAATGAAAGCAGAAATACGTCTTATGAAGGAAG
AATTAAGTGCTATAGAAAGATACCGTACACCAAAAGAAAGAAGTCTTGCACAGTGTACATCAAGTTTGGAAGCGATGCGC
GCGACTAAAGACGGCCTGGAGAGTGAATTACATCAAGAACTCATGGCGCAGTTATCCGTCGCGGATCAGCATCAGGTTGA
TACTTTAAATGATGACATAAGACGCTTAACGAAGGAGAACAAAGAAGCATTTGCGAAGCGAATGCAATTAGAAGCAGAAA
AAAATAAGTTAGAAAACTTATTAACAAATAATTTAGTGAGAAGAAAGGATGAATTAGTTCAAGCTTTACAAGAGATTTCA
GTTGAAGATCGACAACGGCAGCTTGACTCATCAAAGATACAATTAGCGGATATTGAAAAGAGATTAGTAAAAGTAAACGA
GGATTTCAAAGCGCAAAACGAAAAAGTGACCAACGCTATGAAGAAACAAAAATCGGAGTCTGCTGAAGTTGAGAAATGGA
AATTAAAAGAAAAAGAAGCACAGGAGAAAATAGAAGCCGACGCAAAGGATTTAGAAAAATTAGCGAGCAAGTTAAATATC
CTGCAGCATAAAATAGTGGAATGTACACAGAAAATTACTGAACTCGGCGCATTGCCTAGTCATGAAGCTTATTCTAAGTT
TAATACAATGTCCACGAAACAGCTTTTTAAGGAAATGGAGAAAGCAAATAATCATTTAAAAAAATATAGCCATGTGAATA
AAAAGGCTTTGGATCAGTTCATGTCGTTCAGTGATCAGAAAGAAAGATTGGTAAAACGAAAGGAAGAGTTAGATCGAGGC
GACGAGAAAATAAAAGAACTCATGTCTGTACTTGAACAGCGTAAATGCGAAGCGATACAATTTACATTTAAACAGGTGAG
CAAATATTTCAGTGAAGTATTTAAAAAACTTGTACCTTCGGGACATGCGCAATTAGTCATGAGGACTGCAGATGGTGATG
AAGGAGATGATGGAACAGCAGAGCCATCAGATTCTGATAGATTCATTGGCGTAGGTATAAAAGTATCGTTTACGGGACAT
AGAGGCGAAATGAGAGAGATGAATCAATTATCTGGTGGACAAAAGTCACTCGTAGCATTGGCACTCATATTCGCGATACA
AAAGTGCGATCCTGCACCATTTTATTTGTTCGATGAAATCGACCAAGCGCTGGACGCTCAACACAGAAAGGCAGTGGCAG
ATATGATCCACGAGCTTAGCTCTGATGCCCAGTTTATCACCACGACATTCAGGCCAGAATTACTACATCATGCGAACAAA
TTTTATGGAGTGAAATTCAGAAATAAAGTTTCGCATGTCGAATGTGTAACGCGGGAAGAGGCAGCCGATTTCGTTGAGGA
CGATACAACACATGGTTAA
PEP:
>PB24615-PA
VIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRQALLHEGTGPRVISAHVEIIFDNS
DGRLPIDKDEVYLRRVIGSKKDQYFLNKKIVTRNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSHRLKLLREVAGT
RVYDDRREESKSILKETEGKLEKIEDFLRTIEERLKTLEEEKEELKEYQRWDKQRRCLEYTIHERELKENKRKLEELEES
RANSGAEQARLGAEAKTAQEMVRAATKRLKEAKKEVQTAKEERDTLSAEQQQLLKEKNKLTFTINDLLEEVKGDNDSKKR
AQQELEKLKANIALREDELKSLKPEYERMKRVEEECTRELQLKEQKRKELYAKQGRGSQFTTKDERDKWIQNELKQLTKQ
IKDKEEHQKKISEDLKRDAEKQIALEKKIGDHTREMERQRASIDDHNKQYYELTKAKDQCQATRKEQYRQESVLQLNLSG
LKEDLAKADQSLRSMAGKPILNGRDSVRKVLDTFRGRKDMVNEVSSYYGPVIENFNCDKSVYMAVEVTAGNRLFHHIVET
DKFGTKILKEMNNQRLPGETLICRNLEAATTLARDSGLDCVTLEGDQVSSKGSLTGGYFNTLRSRLEIQKTRSELMSQIS
TLETQLTTLKEEIRKADQNISSYVSEMQRTETRNSKAKDIYDKMKAEIRLMKEELSAIERYRTPKERSLAQCTSSLEAMR
ATKDGLESELHQELMAQLSVADQHQVDTLNDDIRRLTKENKEAFAKRMQLEAEKNKLENLLTNNLVRRKDELVQALQEIS
VEDRQRQLDSSKIQLADIEKRLVKVNEDFKAQNEKVTNAMKKQKSESAEVEKWKLKEKEAQEKIEADAKDLEKLASKLNI
LQHKIVECTQKITELGALPSHEAYSKFNTMSTKQLFKEMEKANNHLKKYSHVNKKALDQFMSFSDQKERLVKRKEELDRG
DEKIKELMSVLEQRKCEAIQFTFKQVSKYFSEVFKKLVPSGHAQLVMRTADGDEGDDGTAEPSDSDRFIGVGIKVSFTGH
RGEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVADMIHELSSDAQFITTTFRPELLHHANK
FYGVKFRNKVSHVECVTREEAADFVEDDTTHG
Swiss-ProtTrafficking kinesin-binding protein 1
KEGG     K06669  SMC3, CSPG6; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF02463  SMC_N; RecF/RecN/SMC N terminal domain     
SMARTSM00968     
CoilsCoil

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