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Gene detail [Fasta]

Species Culex quinquefasciatus
GeneCPIJ000296
Positionsupercont3.2:1573596..1596696[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/CPIJ000296
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/CPIJ000296
sequence mRNA: 
>CPIJ000296-RA
TTTTATTTTAGCAAAAACCAGCAGAAGCAGCGGAACAACCCGTATTATCCGTTCAAGTAGGGCCGGAAATCCCTAGAAAA
TCTTTCTTTACTGTTTGCCGACGATTCCCTGACCGGAACCGGATGGAGTTGTGAACCCAACAGTAGTGACCCCGCCGGGA
AAGTGGATTGTTTGCGTCGTGCGGAAACCCAAAGTTGTCGTCGTCGTCCCGGGTGAGAAAAAAAAAGTTGTGAATCTCGC
GTGAGTGTCGTAATTTTCCCGTGATAGATTCTCCCAGTTCCGTGGGAAAGAGGTGGCCATTTGATAAGTGTTTTTATCTG
AAACTTCCGCGTCACGTGAAACCGTTATCGAAGAAGGAACCAGCTGAGTTGGCAGAGTGATTCTCTGTTATTGCTGAACA
ACCACTTTTGCTATTGCAAACTGAGCCAATAGAAGAAGGGGCTGTTCCGCGTGTAAGTGAAACAAAACAGCAGCCGCCGC
CGCCAGGATGATGCACGGACATCCAGCCCCGCCCCAGCACATGGGCCACCCGCCACCACCGCCGCCCCATCTAACGCATC
TGACGAGCGTGCCACCGCCGAGTGTGCCGCCCCAGGGACCACGGATCAACAACAACCGACACCATCATCATCCGCGTGTC
CCGGCCGGCGACCACCACCAGCAGACCTTGGGACCACCCCACATGGTTCCACTGCCCCACCAGCAGCAGCAGCATGGTGG
CAGCCGGAAGCCACACTACGGTAACAACAACGGAATCGTGTCCGGCGGCGGAATACCTCCCAAGCACCACATGGGCAAGA
CACAGCAACCGTACAACAACAGCAACAGCGGCAGCTACCGGACGAGTGGCCACGGGGTACATCACAGCGCCGGCGGCATT
CCGGTGGTGTCGGCGGCCGGCAATCTGGGCACCAAAACGAGGATGATTCCTGCGCATGAACCGAAACCGATCCACAATCA
CACCAACGTGGCCCCACCGGCACCAGTTCCTTCCAGCACCGCCGTACCAACCGTAGCGCATCACGCATCACCTGCAGAAT
CTTCAGCGCAGCAGCAGATTCCCGGAGCGCCGTCCGTATCCGTGACCGTCACGACCGCACCGCAGCCGGCAGGTCCGGTC
ACGACAACGACCAGCAACAATGCCGTTGTCGGTTCCGTGCCACCACCTGTCGTCACGTCGGTGCCGCCACCGACCGAAAC
CGCGGAAGATTCACAGCAAATGCAGCCAATGTCCCAGCTGCTGTCGTCTGTACCAGAAAACTTGGCAAACACTAAAGAGA
AAACCCCAATGTGTTTAGTTAATGAATTAGCACGGTACAACAAGTGCCAGCATCAGTACCGGCTGACCGGAGAGTCGGGC
CCGGCGCACAAGAAACGCTTCACCGTCACGCTCAAGCTGGGCGACGAAGAGTACACGGCGGAGGGTCCGAGCATCAAGAA
GGCTCAGCATAGCGCGGCGAACGAGGCGATTGCCGCGACCAAGTACAAGCATCCGCCGGCCAAGATTAACCGGATCAAGG
TCGGCGGAAAGGCACCGATCGGGAATATTACGCCCACCGTCGAGCTGAACGCGCTGGCCATGAAGCGGGGCGAACCGACT
GTTTACGAAACGGAACAGCTGGTTCCGACGCTGCCGCCTCCTCCGCATGGCAACTTTTTCACGGCACCTCCGCCACCAAA
CTCACACTACGGTGGGGGTGGTGGCGGTGGGGGCTATCATCACCGTACTAACGGCGGCATGTACAGCAATCCGCCACCTC
CGGGTGCGGTCCGGTATGGTGCGCCGGCACCCAACTCGTACAATCGTCGCGGCCTGAAGCCGGACTACCACTCGCGAGGC
TACCTGTACAATCACCATCATCACATGCAACCGATGGTCCACCCTGCGCCGGAATCCTACAAGGTTACGCTGCACGTGGG
GGAGAGGACATTTTTAGGAGAAGGCATCACACTGCAAGCGGCTCGCCACGACGCCGCGGCACGTGCCCTCGAGGTGCTGA
AACCGTTGACGCCGGAAACAACCGGAAACGCCTCTGGTGGCAACTGTCACGACACTTCGATCGACAGTGACGATCCCAAC
TCCGAGCTAAAATCTCCAATCTCTCTCGTGCACGAGCTTGCTCTGAAGCGCAAGATGGCCGTCCAGTTTGAGGTGCACAG
CGAAAAGGGTCCGCCGCACATGAAGGTCTTCACGACGATCTGCAAGGTGGGCACCATTGTGACCGAGGGCGAAGGCAACG
GGAAGAAAATCTCCAAAAAGCGAGCCGCCGAAAAGATGCTCGATGAACTGCGAAACCTCCCGCCAACGTCCCCGGAGAAG
AACGTGCGACCTCCGCTGAAGCCCAAGCGTAAGCTCCCCTTGCCGAAGAAGAAGACCCGCAACCTGATCAAGGAAAACGG
CGAAGAGGATCCGCTGGACATGGTCAATCCCATCAGCCGCCTCATGCAGATTCAGCAGGCTCGCAAGGAAAAGGAACCGG
AGTACACGCTGGTGGAGGAACGCGGCATGGCCCGGCGTCGTGAGTTCATCATGGAGGTGCTGGCCAGCGGTAAAACCGCC
TCAGGCGTGGGTCCGACCAAAAAGATTGCCAAAAAGGAAGCGGCCGAAAGTTTGCTCGTGATGCTCGGCTACGGCCGATC
CACCGTCGCCGCGAACGTCTCCTCACCCAACAAGGAGAACCAGTCGGCGAATGCGAACGAAGGGGGTGGGGTCGAAAAGA
AGCACGGCGGACGTAAGGCTCAGTACAACGAGGGAGGAGCAGCCAAACACGGTGGCAGCGCTGGCCGCCAGATCGTGCCC
GGCGTGCTGCAGTTGAACTCAGGCGTCTCGAACAAAACCAACCAACCGGTTAAGGAGCCAGCGCAGGACGCCATCGACGG
TGGTGATATCAAGCCGATTGCCATTAGTGTGACGAAGCCGGTTATCTCAACTGCTTCGAGTGCGACGACAAATGTTGCAG
CGTCGCCGCCAGCGGCAACCACCACCTCCGCCACAACGGGAGGCAGCTCGTCGAATCCGGACGTCGGTAGAAAGAAGGAG
CAGCTCATGTATTTGGCGCAGCTGCTCAAGTTTGAGGTCATGTTCTCAGACTTCCCGAAGGGCAACCACGGCGAGTACCT
CACGCTGGTCACGCTGTCCACGGATCCGCCCCAGCTGTGCCACGGTAGCGGCGCCAGCCTGGAGGAATCGCACGACGAAG
CTGCGCGCGGTGCGCTCGATATCCTCAGCAAGATCGGGCTGGACAACGTGAAGCCGAAGGGAAGCGGCGGCGCGGTCACC
GGCGATGACAGTAAGTCAAAGAAGTAA
PEP: 
>CPIJ000296-PA
MMHGHPAPPQHMGHPPPPPPHLTHLTSVPPPSVPPQGPRINNNRHHHHPRVPAGDHHQQTLGPPHMVPLPHQQQQHGGSR
KPHYGNNNGIVSGGGIPPKHHMGKTQQPYNNSNSGSYRTSGHGVHHSAGGIPVVSAAGNLGTKTRMIPAHEPKPIHNHTN
VAPPAPVPSSTAVPTVAHHASPAESSAQQQIPGAPSVSVTVTTAPQPAGPVTTTTSNNAVVGSVPPPVVTSVPPPTETAE
DSQQMQPMSQLLSSVPENLANTKEKTPMCLVNELARYNKCQHQYRLTGESGPAHKKRFTVTLKLGDEEYTAEGPSIKKAQ
HSAANEAIAATKYKHPPAKINRIKVGGKAPIGNITPTVELNALAMKRGEPTVYETEQLVPTLPPPPHGNFFTAPPPPNSH
YGGGGGGGGYHHRTNGGMYSNPPPPGAVRYGAPAPNSYNRRGLKPDYHSRGYLYNHHHHMQPMVHPAPESYKVTLHVGER
TFLGEGITLQAARHDAAARALEVLKPLTPETTGNASGGNCHDTSIDSDDPNSELKSPISLVHELALKRKMAVQFEVHSEK
GPPHMKVFTTICKVGTIVTEGEGNGKKISKKRAAEKMLDELRNLPPTSPEKNVRPPLKPKRKLPLPKKKTRNLIKENGEE
DPLDMVNPISRLMQIQQARKEKEPEYTLVEERGMARRREFIMEVLASGKTASGVGPTKKIAKKEAAESLLVMLGYGRSTV
AANVSSPNKENQSANANEGGGVEKKHGGRKAQYNEGGAAKHGGSAGRQIVPGVLQLNSGVSNKTNQPVKEPAQDAIDGGD
IKPIAISVTKPVISTASSATTNVAASPPAATTTSATTGGSSSNPDVGRKKEQLMYLAQLLKFEVMFSDFPKGNHGEYLTL
VTLSTDPPQLCHGSGASLEESHDEAARGALDILSKIGLDNVKPKGSGGAVTGDDSKSKK
Swiss-ProtDouble-stranded RNA-binding protein Staufen homolog 2
KEGG     K17597     
SUPERFAMILYSSF54768  dsRNA-binding domain-like superfamily     
Gene3DG3DSA:3.30.160.20     
PfamPF00035  dsrm; Double-stranded RNA binding motif     
SMARTSM00358     
ProSiteProfilesPS50137  DS_RBD; Double stranded RNA-binding domain (dsRBD) profile.     
PANTHERPTHR10910

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