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Gene detail [Fasta]

Species Culex quinquefasciatus
GeneCPIJ009279
Positionsupercont3.218:415320..419191[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/CPIJ009279
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/CPIJ009279
sequence mRNA: 
>CPIJ009279-RA
TCGCCGAGTCCAGAGAGTGACAATTCTGGCTACTATAGGAACCGAAACCGCAACCAGCGGGATGACCAACGGGACCAGCG
CGGCAACCGTGGACGCTCAAAGGAACGGAACCACTACCAGCGGAACCGGTACAGCCGCAGCAGATCGCGTTCGTACAGCC
GGGAGCGTTACATTAGCGGGAATAGCCGGCGCAGTCCGGAGCGGGATTTGTACCGGGACTTGATCGATCAGGACTATGGC
GATAACAGCTCGTACGATAACCGGGATCGCTATCGGCATCGTAGTCGGGACAGGGATCGTCGGTCCTCGAGGGAACGGGA
TCGCGACCGCCGCGGCGAACGCGACAAGTCCAGCAAGCGTGGCGGCTACTCGCCTCAGCCGCCGGACCCGACGGATTTTG
ACGATAACTACGACAGCGACAACAACCAGGAGTTTTTCTACCAGCAGAAGCCAAACAACAAGATCATTGTGCGCGGGCTG
GCCGCCCACATTACCGAGGCCGACATCAACAGCGATCTCATCCAGTGTGGCCTGCAGGCCCTCCACGTGCGGCTGATTCG
GCGCAAGAAAACAGGTGCATCGAGAGGGTTCGCTTTTGTCGAGTTCAGAACCGAAGAGGAAGCAACTCGCTGGATTTGCT
ACAAACAGGGAATGCTGATCTTCAACGATCACCGGGCCATCATGCAGTACACGTACTCGCTGCCGGCGGAGATGCGCGCC
AACAAGCCCCAAACGGACTGGTACTGCGCCAAGTGTGGCGTGTTCAACTTCAAGCGGCGTGAGAACTGCTTCAAGTGCTT
CGCGTCGCGCGAGGAGAGCGAAAAGGGCGGCGAAGGAAGCGACGAAATCAGTAGCATCCTCACGAAGAAGATCATGCTGC
GCAATCTGGACGTGCTGACGAACGAGGAGAGCGTGCTGTGCGCGATGCAGGAGAAGATCCCCGAGCTCGTGTCGAAGATT
AGCAAAATTATGGTCTGCCGGGATCCGCTGACGCAGACGTCGCGGGGCATCTGCTATCTGCACTTTGACAACCTGCTCGA
CTCGATGAACACGCACAACGCGTTGAAGGCGATCGAGCCGATTCTGAAGATCGACAACCGCGAGGTGCTGATCACGTACT
GCATGGACACGGAGAACCGCAACCTGGTCAAGAGTGGCAAAGGCGGTGGAGGTGGAGGTAATCAGGGCAACGGGAACAAC
TACCAGGATCCGTCCGGGGGAAATCCACCCCCTGGTGCTTACCCTGGAAACTATCAGTACACGATGGCGGACGTTCCGCG
GTTGGCCGAGTACAGTGCAGCGGTTTACGCGTCCAACCCGGCCGAGCACGAGCACTACCTGCAGTTTTACACCAACTACT
ACGTAACGCAGATCTCGCAAGGACAGATGAGCAACTTCCCCACCGAAGCGCAGCTCGGCGAAAATGCCAACTCCGGCGCG
GCCGTAGCACAGTCCGCGCTAGCGCGTAAGCAAGGCTCCAAGGGCAAGTCGGACTCAACGGCAACTTCCGGCCCGGCTAC
CGTTGCCCCCCTGCAAATCCCCAACGGAACCGACGGCAGGCAGTATCCCCCGCCGGACGTGACCCAGTACCAGTACGACG
AAACGTCCGGATTCTACTACGACCCCTCAACCGGCCTGTACTACGACTCCAACTCGCAGTACTACTACAACAACGAAACC
TGCTCCTACCTTTACTGGGACGCCGAAAATAGCACGTACGTGGCAGCGCCATCCTCTTCAACGACCTCCTCCACCCCAGC
CGCGACCATCTCAACCGAACCCCCACCGCCGGAACCACCCGCAGCTACCACCGCCGCAAACGGCGAAAAACCAGAAAAAT
CCAAAACCAAGGAGCAACCCCACGACAAGGTCAAGGTCGCCAAAAAGATCGTCAAAGACATGGAAAAGTGGGCCAAACAG
CTGAACCAAAAGAAGGACTACAGCGTGCTCCAGCCCCCGGCCAAGGTCGAAGAGGCCACCCTCTACTCGTCCCAGGGCCA
AATCACCGTCAAGCAACCCGCGGGACCCTCCGGCGGCGGAGGCTACGCCGACGTCGGCTTCTCCCTGCTCGAAAAGAAGC
AAAGCACCGCGGCCGTCTCCAACTTCCTCATGACACAGGCCAAGCCAACAACCGCCACGCCCAAAAGCACCGCCAACACC
CTCGTCTCCTCGTACGGTTCCGACTCGGACAACGAAGCCGACGGCGACGGCTTCAGCGAGTCGGACTTTGTCGACTTTGA
GAAGCTGACGTGTCTGCTGTGCAAGCGCGCATTCCAATCGCACGAAATCCTGAACAAGCATTTGAAAATGTCCTCCCTGC
ACAAGGAAAACATGCAGAAGATGCGCGGACAGGGAGGTGGTGCGGGTGGCGGTGGCGGTGGCGGCGGTGGCATGAACAAG
GGCGGCTCGTACCGGGACCGGGCGAAGGAACGGCGGCTCAAGTACGGCGAAGCGGATCCACCGCCGGTCAACAAAAGCAA
GGAACGCTTCCAGCGGGAGCTCGAGAAGCAATCGTCGGCACCGACGCCCAATCTGGCGGCCATCCCGATCGGCCAGAACA
ACGTCGGCAATAAGCTGCTCCAGAAGATGGGCTGGTCCGAGGGGCAGGGCCTGGGCCGGAGCAACCAGGGCAGGACGAAC
ATCATTGAGACTGAGACGCGGGTACAGAACGCCGGGCTGGGCATTAAGGCGACCAATTACGCGGCAACTGGGGACGATTA
CAAGACTTATATCAAGAAGATGATGAAGTCGCGGTACGAGCAGGCGTAAACGCGAGGCTTGCTTTCTAACTGTCTTATAT
TATTGTAGGTTTTATTCTAGTTTCAAGAATATATTGTTGTAGAATTCCAATTTGTAATTAATTAAATAGATAATTTTTAT
TCATACAA
PEP: 
>CPIJ009279-PA
SPSPESDNSGYYRNRNRNQRDDQRDQRGNRGRSKERNHYQRNRYSRSRSRSYSRERYISGNSRRSPERDLYRDLIDQDYG
DNSSYDNRDRYRHRSRDRDRRSSRERDRDRRGERDKSSKRGGYSPQPPDPTDFDDNYDSDNNQEFFYQQKPNNKIIVRGL
AAHITEADINSDLIQCGLQALHVRLIRRKKTGASRGFAFVEFRTEEEATRWICYKQGMLIFNDHRAIMQYTYSLPAEMRA
NKPQTDWYCAKCGVFNFKRRENCFKCFASREESEKGGEGSDEISSILTKKIMLRNLDVLTNEESVLCAMQEKIPELVSKI
SKIMVCRDPLTQTSRGICYLHFDNLLDSMNTHNALKAIEPILKIDNREVLITYCMDTENRNLVKSGKGGGGGGNQGNGNN
YQDPSGGNPPPGAYPGNYQYTMADVPRLAEYSAAVYASNPAEHEHYLQFYTNYYVTQISQGQMSNFPTEAQLGENANSGA
AVAQSALARKQGSKGKSDSTATSGPATVAPLQIPNGTDGRQYPPPDVTQYQYDETSGFYYDPSTGLYYDSNSQYYYNNET
CSYLYWDAENSTYVAAPSSSTTSSTPAATISTEPPPPEPPAATTAANGEKPEKSKTKEQPHDKVKVAKKIVKDMEKWAKQ
LNQKKDYSVLQPPAKVEEATLYSSQGQITVKQPAGPSGGGGYADVGFSLLEKKQSTAAVSNFLMTQAKPTTATPKSTANT
LVSSYGSDSDNEADGDGFSESDFVDFEKLTCLLCKRAFQSHEILNKHLKMSSLHKENMQKMRGQGGGAGGGGGGGGGMNK
GGSYRDRAKERRLKYGEADPPPVNKSKERFQRELEKQSSAPTPNLAAIPIGQNNVGNKLLQKMGWSEGQGLGRSNQGRTN
IIETETRVQNAGLGIKATNYAATGDDYKTYIKKMMKSRYEQA
Swiss-ProtRNA-binding protein 5-A
KEGG     K13094     
SUPERFAMILYSSF54928  RNA-binding domain, RBD superfamily     
Gene3DG3DSA:4.10.1060.10     
PfamPF14259  RRM_6; RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)     
SMARTSM00547     
ProSiteProfilesPS50199  ZF_RANBP2_2; Zinc finger RanBP2 type profile.     
ProSitePatternsPS01358  ZF_RANBP2_1; Zinc finger RanBP2-type signature.     
PANTHERPTHR13948

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